Automated assembly of species metabolomes through data submission into a public repository

Following similar global efforts to exchange genomic and other biomedical data, global databases in metabolomics have now been established. MetaboLights, the first general purpose, publically available, cross-species, cross-application database in metabolomics, has become the fastest growing data re...

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Detalles Bibliográficos
Autores principales: Salek, Reza M., Conesa, Pablo, Cochrane, Keeva, Haug, Kenneth, Williams, Mark, Kale, Namrata, Moreno, Pablo, Jayaseelan, Kalai Vanii, Macias, Jose Ramon, Nainala, Venkata chandrasekhar, Hall, Robert D., Reed, Laura K., Viant, Mark R., O’Donovan, Claire, Steinbeck, Christoph
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Commentary
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737527/
https://www.ncbi.nlm.nih.gov/pubmed/28830114
http://dx.doi.org/10.1093/gigascience/gix062
Descripción
Sumario:Following similar global efforts to exchange genomic and other biomedical data, global databases in metabolomics have now been established. MetaboLights, the first general purpose, publically available, cross-species, cross-application database in metabolomics, has become the fastest growing data repository at the European Bioinformatics Institute in terms of data volume. Here we present the automated assembly of species metabolomes in MetaboLights, a crucial reference for chemical biology, which is growing through user submissions.

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