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Improving resolution of dynamic communities in human brain networks through targeted node removal

Current approaches to dynamic community detection in complex networks can fail to identify multi-scale community structure, or to resolve key features of community dynamics. We propose a targeted node removal technique to improve the resolution of community detection. Using synthetic oscillator netw...

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Autores principales: Schlesinger, Kimberly J., Turner, Benjamin O., Grafton, Scott T., Miller, Michael B., Carlson, Jean M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737970/
https://www.ncbi.nlm.nih.gov/pubmed/29261662
http://dx.doi.org/10.1371/journal.pone.0187715
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author Schlesinger, Kimberly J.
Turner, Benjamin O.
Grafton, Scott T.
Miller, Michael B.
Carlson, Jean M.
author_facet Schlesinger, Kimberly J.
Turner, Benjamin O.
Grafton, Scott T.
Miller, Michael B.
Carlson, Jean M.
author_sort Schlesinger, Kimberly J.
collection PubMed
description Current approaches to dynamic community detection in complex networks can fail to identify multi-scale community structure, or to resolve key features of community dynamics. We propose a targeted node removal technique to improve the resolution of community detection. Using synthetic oscillator networks with well-defined “ground truth” communities, we quantify the community detection performance of a common modularity maximization algorithm. We show that the performance of the algorithm on communities of a given size deteriorates when these communities are embedded in multi-scale networks with communities of different sizes, compared to the performance in a single-scale network. We demonstrate that targeted node removal during community detection improves performance on multi-scale networks, particularly when removing the most functionally cohesive nodes. Applying this approach to network neuroscience, we compare dynamic functional brain networks derived from fMRI data taken during both repetitive single-task and varied multi-task experiments. After the removal of regions in visual cortex, the most coherent functional brain area during the tasks, community detection is better able to resolve known functional brain systems into communities. In addition, node removal enables the algorithm to distinguish clear differences in brain network dynamics between these experiments, revealing task-switching behavior that was not identified with the visual regions present in the network. These results indicate that targeted node removal can improve spatial and temporal resolution in community detection, and they demonstrate a promising approach for comparison of network dynamics between neuroscientific data sets with different resolution parameters.
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spelling pubmed-57379702017-12-29 Improving resolution of dynamic communities in human brain networks through targeted node removal Schlesinger, Kimberly J. Turner, Benjamin O. Grafton, Scott T. Miller, Michael B. Carlson, Jean M. PLoS One Research Article Current approaches to dynamic community detection in complex networks can fail to identify multi-scale community structure, or to resolve key features of community dynamics. We propose a targeted node removal technique to improve the resolution of community detection. Using synthetic oscillator networks with well-defined “ground truth” communities, we quantify the community detection performance of a common modularity maximization algorithm. We show that the performance of the algorithm on communities of a given size deteriorates when these communities are embedded in multi-scale networks with communities of different sizes, compared to the performance in a single-scale network. We demonstrate that targeted node removal during community detection improves performance on multi-scale networks, particularly when removing the most functionally cohesive nodes. Applying this approach to network neuroscience, we compare dynamic functional brain networks derived from fMRI data taken during both repetitive single-task and varied multi-task experiments. After the removal of regions in visual cortex, the most coherent functional brain area during the tasks, community detection is better able to resolve known functional brain systems into communities. In addition, node removal enables the algorithm to distinguish clear differences in brain network dynamics between these experiments, revealing task-switching behavior that was not identified with the visual regions present in the network. These results indicate that targeted node removal can improve spatial and temporal resolution in community detection, and they demonstrate a promising approach for comparison of network dynamics between neuroscientific data sets with different resolution parameters. Public Library of Science 2017-12-20 /pmc/articles/PMC5737970/ /pubmed/29261662 http://dx.doi.org/10.1371/journal.pone.0187715 Text en © 2017 Schlesinger et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Schlesinger, Kimberly J.
Turner, Benjamin O.
Grafton, Scott T.
Miller, Michael B.
Carlson, Jean M.
Improving resolution of dynamic communities in human brain networks through targeted node removal
title Improving resolution of dynamic communities in human brain networks through targeted node removal
title_full Improving resolution of dynamic communities in human brain networks through targeted node removal
title_fullStr Improving resolution of dynamic communities in human brain networks through targeted node removal
title_full_unstemmed Improving resolution of dynamic communities in human brain networks through targeted node removal
title_short Improving resolution of dynamic communities in human brain networks through targeted node removal
title_sort improving resolution of dynamic communities in human brain networks through targeted node removal
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737970/
https://www.ncbi.nlm.nih.gov/pubmed/29261662
http://dx.doi.org/10.1371/journal.pone.0187715
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