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The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome se...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Genética
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738615/ https://www.ncbi.nlm.nih.gov/pubmed/29064513 http://dx.doi.org/10.1590/1678-4685-GMB-2016-0308 |
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author | Yuan, Xiao-Long Mao, Xin-Xin Liu, Xin-Min Cheng, Sen Zhang, Peng Zhang, Zhong-Feng |
author_facet | Yuan, Xiao-Long Mao, Xin-Xin Liu, Xin-Min Cheng, Sen Zhang, Peng Zhang, Zhong-Feng |
author_sort | Yuan, Xiao-Long |
collection | PubMed |
description | Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species. |
format | Online Article Text |
id | pubmed-5738615 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Sociedade Brasileira de Genética |
record_format | MEDLINE/PubMed |
spelling | pubmed-57386152017-12-29 The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes Yuan, Xiao-Long Mao, Xin-Xin Liu, Xin-Min Cheng, Sen Zhang, Peng Zhang, Zhong-Feng Genet Mol Biol Genetics of Microorganisms Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species. Sociedade Brasileira de Genética 2017-10-23 2017 /pmc/articles/PMC5738615/ /pubmed/29064513 http://dx.doi.org/10.1590/1678-4685-GMB-2016-0308 Text en Copyright © 2017, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited. |
spellingShingle | Genetics of Microorganisms Yuan, Xiao-Long Mao, Xin-Xin Liu, Xin-Min Cheng, Sen Zhang, Peng Zhang, Zhong-Feng The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes |
title | The complete mitochondrial genome of Engyodontium
album and comparative analyses with Ascomycota
mitogenomes |
title_full | The complete mitochondrial genome of Engyodontium
album and comparative analyses with Ascomycota
mitogenomes |
title_fullStr | The complete mitochondrial genome of Engyodontium
album and comparative analyses with Ascomycota
mitogenomes |
title_full_unstemmed | The complete mitochondrial genome of Engyodontium
album and comparative analyses with Ascomycota
mitogenomes |
title_short | The complete mitochondrial genome of Engyodontium
album and comparative analyses with Ascomycota
mitogenomes |
title_sort | complete mitochondrial genome of engyodontium
album and comparative analyses with ascomycota
mitogenomes |
topic | Genetics of Microorganisms |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738615/ https://www.ncbi.nlm.nih.gov/pubmed/29064513 http://dx.doi.org/10.1590/1678-4685-GMB-2016-0308 |
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