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The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes

Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome se...

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Autores principales: Yuan, Xiao-Long, Mao, Xin-Xin, Liu, Xin-Min, Cheng, Sen, Zhang, Peng, Zhang, Zhong-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738615/
https://www.ncbi.nlm.nih.gov/pubmed/29064513
http://dx.doi.org/10.1590/1678-4685-GMB-2016-0308
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author Yuan, Xiao-Long
Mao, Xin-Xin
Liu, Xin-Min
Cheng, Sen
Zhang, Peng
Zhang, Zhong-Feng
author_facet Yuan, Xiao-Long
Mao, Xin-Xin
Liu, Xin-Min
Cheng, Sen
Zhang, Peng
Zhang, Zhong-Feng
author_sort Yuan, Xiao-Long
collection PubMed
description Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species.
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spelling pubmed-57386152017-12-29 The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes Yuan, Xiao-Long Mao, Xin-Xin Liu, Xin-Min Cheng, Sen Zhang, Peng Zhang, Zhong-Feng Genet Mol Biol Genetics of Microorganisms Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species. Sociedade Brasileira de Genética 2017-10-23 2017 /pmc/articles/PMC5738615/ /pubmed/29064513 http://dx.doi.org/10.1590/1678-4685-GMB-2016-0308 Text en Copyright © 2017, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited.
spellingShingle Genetics of Microorganisms
Yuan, Xiao-Long
Mao, Xin-Xin
Liu, Xin-Min
Cheng, Sen
Zhang, Peng
Zhang, Zhong-Feng
The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title_full The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title_fullStr The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title_full_unstemmed The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title_short The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title_sort complete mitochondrial genome of engyodontium album and comparative analyses with ascomycota mitogenomes
topic Genetics of Microorganisms
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738615/
https://www.ncbi.nlm.nih.gov/pubmed/29064513
http://dx.doi.org/10.1590/1678-4685-GMB-2016-0308
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