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Non-linear auto-regressive models for cross-frequency coupling in neural time series
We address the issue of reliably detecting and quantifying cross-frequency coupling (CFC) in neural time series. Based on non-linear auto-regressive models, the proposed method provides a generative and parametric model of the time-varying spectral content of the signals. As this method models the e...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5739510/ https://www.ncbi.nlm.nih.gov/pubmed/29227989 http://dx.doi.org/10.1371/journal.pcbi.1005893 |
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author | Dupré la Tour, Tom Tallot, Lucille Grabot, Laetitia Doyère, Valérie van Wassenhove, Virginie Grenier, Yves Gramfort, Alexandre |
author_facet | Dupré la Tour, Tom Tallot, Lucille Grabot, Laetitia Doyère, Valérie van Wassenhove, Virginie Grenier, Yves Gramfort, Alexandre |
author_sort | Dupré la Tour, Tom |
collection | PubMed |
description | We address the issue of reliably detecting and quantifying cross-frequency coupling (CFC) in neural time series. Based on non-linear auto-regressive models, the proposed method provides a generative and parametric model of the time-varying spectral content of the signals. As this method models the entire spectrum simultaneously, it avoids the pitfalls related to incorrect filtering or the use of the Hilbert transform on wide-band signals. As the model is probabilistic, it also provides a score of the model “goodness of fit” via the likelihood, enabling easy and legitimate model selection and parameter comparison; this data-driven feature is unique to our model-based approach. Using three datasets obtained with invasive neurophysiological recordings in humans and rodents, we demonstrate that these models are able to replicate previous results obtained with other metrics, but also reveal new insights such as the influence of the amplitude of the slow oscillation. Using simulations, we demonstrate that our parametric method can reveal neural couplings with shorter signals than non-parametric methods. We also show how the likelihood can be used to find optimal filtering parameters, suggesting new properties on the spectrum of the driving signal, but also to estimate the optimal delay between the coupled signals, enabling a directionality estimation in the coupling. |
format | Online Article Text |
id | pubmed-5739510 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-57395102018-01-10 Non-linear auto-regressive models for cross-frequency coupling in neural time series Dupré la Tour, Tom Tallot, Lucille Grabot, Laetitia Doyère, Valérie van Wassenhove, Virginie Grenier, Yves Gramfort, Alexandre PLoS Comput Biol Research Article We address the issue of reliably detecting and quantifying cross-frequency coupling (CFC) in neural time series. Based on non-linear auto-regressive models, the proposed method provides a generative and parametric model of the time-varying spectral content of the signals. As this method models the entire spectrum simultaneously, it avoids the pitfalls related to incorrect filtering or the use of the Hilbert transform on wide-band signals. As the model is probabilistic, it also provides a score of the model “goodness of fit” via the likelihood, enabling easy and legitimate model selection and parameter comparison; this data-driven feature is unique to our model-based approach. Using three datasets obtained with invasive neurophysiological recordings in humans and rodents, we demonstrate that these models are able to replicate previous results obtained with other metrics, but also reveal new insights such as the influence of the amplitude of the slow oscillation. Using simulations, we demonstrate that our parametric method can reveal neural couplings with shorter signals than non-parametric methods. We also show how the likelihood can be used to find optimal filtering parameters, suggesting new properties on the spectrum of the driving signal, but also to estimate the optimal delay between the coupled signals, enabling a directionality estimation in the coupling. Public Library of Science 2017-12-11 /pmc/articles/PMC5739510/ /pubmed/29227989 http://dx.doi.org/10.1371/journal.pcbi.1005893 Text en © 2017 Dupré la Tour et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Dupré la Tour, Tom Tallot, Lucille Grabot, Laetitia Doyère, Valérie van Wassenhove, Virginie Grenier, Yves Gramfort, Alexandre Non-linear auto-regressive models for cross-frequency coupling in neural time series |
title | Non-linear auto-regressive models for cross-frequency coupling in neural time series |
title_full | Non-linear auto-regressive models for cross-frequency coupling in neural time series |
title_fullStr | Non-linear auto-regressive models for cross-frequency coupling in neural time series |
title_full_unstemmed | Non-linear auto-regressive models for cross-frequency coupling in neural time series |
title_short | Non-linear auto-regressive models for cross-frequency coupling in neural time series |
title_sort | non-linear auto-regressive models for cross-frequency coupling in neural time series |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5739510/ https://www.ncbi.nlm.nih.gov/pubmed/29227989 http://dx.doi.org/10.1371/journal.pcbi.1005893 |
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