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Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc

Seamounts are undersea mountains rising abruptly from the sea floor and interacting dynamically with underwater currents. They represent unique biological habitats with various microbial community structures. Certain seamount bacteria form conspicuous extracellular iron oxide structures, including e...

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Autores principales: Liu, Jia, Zhang, Wenyan, Li, Xuegong, Li, Xuegang, Chen, Xumiao, Li, Jin-Hua, Teng, Zhaojie, Xu, Cong, Santini, Claire-Lise, Zhao, Li, Zhao, Yuan, Zhang, Heng, Zhang, Wei-Jia, Xu, Kuidong, Li, Chaolun, Pan, Yongxin, Xiao, Tian, Pan, Hongmiao, Wu, Long-Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5740136/
https://www.ncbi.nlm.nih.gov/pubmed/29269894
http://dx.doi.org/10.1038/s41598-017-17445-4
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author Liu, Jia
Zhang, Wenyan
Li, Xuegong
Li, Xuegang
Chen, Xumiao
Li, Jin-Hua
Teng, Zhaojie
Xu, Cong
Santini, Claire-Lise
Zhao, Li
Zhao, Yuan
Zhang, Heng
Zhang, Wei-Jia
Xu, Kuidong
Li, Chaolun
Pan, Yongxin
Xiao, Tian
Pan, Hongmiao
Wu, Long-Fei
author_facet Liu, Jia
Zhang, Wenyan
Li, Xuegong
Li, Xuegang
Chen, Xumiao
Li, Jin-Hua
Teng, Zhaojie
Xu, Cong
Santini, Claire-Lise
Zhao, Li
Zhao, Yuan
Zhang, Heng
Zhang, Wei-Jia
Xu, Kuidong
Li, Chaolun
Pan, Yongxin
Xiao, Tian
Pan, Hongmiao
Wu, Long-Fei
author_sort Liu, Jia
collection PubMed
description Seamounts are undersea mountains rising abruptly from the sea floor and interacting dynamically with underwater currents. They represent unique biological habitats with various microbial community structures. Certain seamount bacteria form conspicuous extracellular iron oxide structures, including encrusted stalks, flattened bifurcating tubes, and filamentous sheaths. To extend our knowledge of seamount ecosystems, we performed an integrated study on population structure and the occurrence of magnetotactic bacteria (MTB) that synthesize intracellular iron oxide nanocrystals in sediments of a seamount in the Mariana volcanic arc. We found Proteobacteria dominant at 13 of 14 stations, but ranked second in abundance to members of the phylum Firmicutes at the deep-water station located on a steep slope facing the Mariana-Yap Trench. Live MTB dwell in biogenic sediments from all 14 stations ranging in depth from 238 to 2,023 m. Some magnetotactic cocci possess the most complex flagellar apparatus yet reported; 19 flagella are arranged in a 3:4:5:4:3 array within a flagellar bundle. Phylogenetic analysis of 16S rRNA gene sequences identified 16 novel species of MTB specific to this seamount. Together the results obtained indicate that geographic properties of the seamount stations are important in shaping the bacterial community structure and the MTB composition.
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spelling pubmed-57401362018-01-03 Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc Liu, Jia Zhang, Wenyan Li, Xuegong Li, Xuegang Chen, Xumiao Li, Jin-Hua Teng, Zhaojie Xu, Cong Santini, Claire-Lise Zhao, Li Zhao, Yuan Zhang, Heng Zhang, Wei-Jia Xu, Kuidong Li, Chaolun Pan, Yongxin Xiao, Tian Pan, Hongmiao Wu, Long-Fei Sci Rep Article Seamounts are undersea mountains rising abruptly from the sea floor and interacting dynamically with underwater currents. They represent unique biological habitats with various microbial community structures. Certain seamount bacteria form conspicuous extracellular iron oxide structures, including encrusted stalks, flattened bifurcating tubes, and filamentous sheaths. To extend our knowledge of seamount ecosystems, we performed an integrated study on population structure and the occurrence of magnetotactic bacteria (MTB) that synthesize intracellular iron oxide nanocrystals in sediments of a seamount in the Mariana volcanic arc. We found Proteobacteria dominant at 13 of 14 stations, but ranked second in abundance to members of the phylum Firmicutes at the deep-water station located on a steep slope facing the Mariana-Yap Trench. Live MTB dwell in biogenic sediments from all 14 stations ranging in depth from 238 to 2,023 m. Some magnetotactic cocci possess the most complex flagellar apparatus yet reported; 19 flagella are arranged in a 3:4:5:4:3 array within a flagellar bundle. Phylogenetic analysis of 16S rRNA gene sequences identified 16 novel species of MTB specific to this seamount. Together the results obtained indicate that geographic properties of the seamount stations are important in shaping the bacterial community structure and the MTB composition. Nature Publishing Group UK 2017-12-21 /pmc/articles/PMC5740136/ /pubmed/29269894 http://dx.doi.org/10.1038/s41598-017-17445-4 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Liu, Jia
Zhang, Wenyan
Li, Xuegong
Li, Xuegang
Chen, Xumiao
Li, Jin-Hua
Teng, Zhaojie
Xu, Cong
Santini, Claire-Lise
Zhao, Li
Zhao, Yuan
Zhang, Heng
Zhang, Wei-Jia
Xu, Kuidong
Li, Chaolun
Pan, Yongxin
Xiao, Tian
Pan, Hongmiao
Wu, Long-Fei
Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc
title Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc
title_full Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc
title_fullStr Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc
title_full_unstemmed Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc
title_short Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc
title_sort bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the mariana volcanic arc
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5740136/
https://www.ncbi.nlm.nih.gov/pubmed/29269894
http://dx.doi.org/10.1038/s41598-017-17445-4
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