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Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc
Seamounts are undersea mountains rising abruptly from the sea floor and interacting dynamically with underwater currents. They represent unique biological habitats with various microbial community structures. Certain seamount bacteria form conspicuous extracellular iron oxide structures, including e...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5740136/ https://www.ncbi.nlm.nih.gov/pubmed/29269894 http://dx.doi.org/10.1038/s41598-017-17445-4 |
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author | Liu, Jia Zhang, Wenyan Li, Xuegong Li, Xuegang Chen, Xumiao Li, Jin-Hua Teng, Zhaojie Xu, Cong Santini, Claire-Lise Zhao, Li Zhao, Yuan Zhang, Heng Zhang, Wei-Jia Xu, Kuidong Li, Chaolun Pan, Yongxin Xiao, Tian Pan, Hongmiao Wu, Long-Fei |
author_facet | Liu, Jia Zhang, Wenyan Li, Xuegong Li, Xuegang Chen, Xumiao Li, Jin-Hua Teng, Zhaojie Xu, Cong Santini, Claire-Lise Zhao, Li Zhao, Yuan Zhang, Heng Zhang, Wei-Jia Xu, Kuidong Li, Chaolun Pan, Yongxin Xiao, Tian Pan, Hongmiao Wu, Long-Fei |
author_sort | Liu, Jia |
collection | PubMed |
description | Seamounts are undersea mountains rising abruptly from the sea floor and interacting dynamically with underwater currents. They represent unique biological habitats with various microbial community structures. Certain seamount bacteria form conspicuous extracellular iron oxide structures, including encrusted stalks, flattened bifurcating tubes, and filamentous sheaths. To extend our knowledge of seamount ecosystems, we performed an integrated study on population structure and the occurrence of magnetotactic bacteria (MTB) that synthesize intracellular iron oxide nanocrystals in sediments of a seamount in the Mariana volcanic arc. We found Proteobacteria dominant at 13 of 14 stations, but ranked second in abundance to members of the phylum Firmicutes at the deep-water station located on a steep slope facing the Mariana-Yap Trench. Live MTB dwell in biogenic sediments from all 14 stations ranging in depth from 238 to 2,023 m. Some magnetotactic cocci possess the most complex flagellar apparatus yet reported; 19 flagella are arranged in a 3:4:5:4:3 array within a flagellar bundle. Phylogenetic analysis of 16S rRNA gene sequences identified 16 novel species of MTB specific to this seamount. Together the results obtained indicate that geographic properties of the seamount stations are important in shaping the bacterial community structure and the MTB composition. |
format | Online Article Text |
id | pubmed-5740136 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-57401362018-01-03 Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc Liu, Jia Zhang, Wenyan Li, Xuegong Li, Xuegang Chen, Xumiao Li, Jin-Hua Teng, Zhaojie Xu, Cong Santini, Claire-Lise Zhao, Li Zhao, Yuan Zhang, Heng Zhang, Wei-Jia Xu, Kuidong Li, Chaolun Pan, Yongxin Xiao, Tian Pan, Hongmiao Wu, Long-Fei Sci Rep Article Seamounts are undersea mountains rising abruptly from the sea floor and interacting dynamically with underwater currents. They represent unique biological habitats with various microbial community structures. Certain seamount bacteria form conspicuous extracellular iron oxide structures, including encrusted stalks, flattened bifurcating tubes, and filamentous sheaths. To extend our knowledge of seamount ecosystems, we performed an integrated study on population structure and the occurrence of magnetotactic bacteria (MTB) that synthesize intracellular iron oxide nanocrystals in sediments of a seamount in the Mariana volcanic arc. We found Proteobacteria dominant at 13 of 14 stations, but ranked second in abundance to members of the phylum Firmicutes at the deep-water station located on a steep slope facing the Mariana-Yap Trench. Live MTB dwell in biogenic sediments from all 14 stations ranging in depth from 238 to 2,023 m. Some magnetotactic cocci possess the most complex flagellar apparatus yet reported; 19 flagella are arranged in a 3:4:5:4:3 array within a flagellar bundle. Phylogenetic analysis of 16S rRNA gene sequences identified 16 novel species of MTB specific to this seamount. Together the results obtained indicate that geographic properties of the seamount stations are important in shaping the bacterial community structure and the MTB composition. Nature Publishing Group UK 2017-12-21 /pmc/articles/PMC5740136/ /pubmed/29269894 http://dx.doi.org/10.1038/s41598-017-17445-4 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Liu, Jia Zhang, Wenyan Li, Xuegong Li, Xuegang Chen, Xumiao Li, Jin-Hua Teng, Zhaojie Xu, Cong Santini, Claire-Lise Zhao, Li Zhao, Yuan Zhang, Heng Zhang, Wei-Jia Xu, Kuidong Li, Chaolun Pan, Yongxin Xiao, Tian Pan, Hongmiao Wu, Long-Fei Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc |
title | Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc |
title_full | Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc |
title_fullStr | Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc |
title_full_unstemmed | Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc |
title_short | Bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the Mariana volcanic arc |
title_sort | bacterial community structure and novel species of magnetotactic bacteria in sediments from a seamount in the mariana volcanic arc |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5740136/ https://www.ncbi.nlm.nih.gov/pubmed/29269894 http://dx.doi.org/10.1038/s41598-017-17445-4 |
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