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Application of Fourier transform infrared spectroscopy with chemometrics on postmortem interval estimation based on pericardial fluids

Postmortem interval (PMI) evaluation remains a challenge in the forensic community due to the lack of efficient methods. Studies have focused on chemical analysis of biofluids for PMI estimation; however, no reports using spectroscopic methods in pericardial fluid (PF) are available. In this study,...

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Autores principales: Zhang, Ji, Li, Bing, Wang, Qi, Wei, Xin, Feng, Weibo, Chen, Yijiu, Huang, Ping, Wang, Zhenyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5740144/
https://www.ncbi.nlm.nih.gov/pubmed/29269843
http://dx.doi.org/10.1038/s41598-017-18228-7
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author Zhang, Ji
Li, Bing
Wang, Qi
Wei, Xin
Feng, Weibo
Chen, Yijiu
Huang, Ping
Wang, Zhenyuan
author_facet Zhang, Ji
Li, Bing
Wang, Qi
Wei, Xin
Feng, Weibo
Chen, Yijiu
Huang, Ping
Wang, Zhenyuan
author_sort Zhang, Ji
collection PubMed
description Postmortem interval (PMI) evaluation remains a challenge in the forensic community due to the lack of efficient methods. Studies have focused on chemical analysis of biofluids for PMI estimation; however, no reports using spectroscopic methods in pericardial fluid (PF) are available. In this study, Fourier transform infrared (FTIR) spectroscopy with attenuated total reflectance (ATR) accessory was applied to collect comprehensive biochemical information from rabbit PF at different PMIs. The PMI-dependent spectral signature was determined by two-dimensional (2D) correlation analysis. The partial least square (PLS) and nu-support vector machine (nu-SVM) models were then established based on the acquired spectral dataset. Spectral variables associated with amide I, amide II, COO(−), C-H bending, and C-O or C-OH vibrations arising from proteins, polypeptides, amino acids and carbohydrates, respectively, were susceptible to PMI in 2D correlation analysis. Moreover, the nu-SVM model appeared to achieve a more satisfactory prediction than the PLS model in calibration; the reliability of both models was determined in an external validation set. The study shows the possibility of application of ATR-FTIR methods in postmortem interval estimation using PF samples.
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spelling pubmed-57401442018-01-03 Application of Fourier transform infrared spectroscopy with chemometrics on postmortem interval estimation based on pericardial fluids Zhang, Ji Li, Bing Wang, Qi Wei, Xin Feng, Weibo Chen, Yijiu Huang, Ping Wang, Zhenyuan Sci Rep Article Postmortem interval (PMI) evaluation remains a challenge in the forensic community due to the lack of efficient methods. Studies have focused on chemical analysis of biofluids for PMI estimation; however, no reports using spectroscopic methods in pericardial fluid (PF) are available. In this study, Fourier transform infrared (FTIR) spectroscopy with attenuated total reflectance (ATR) accessory was applied to collect comprehensive biochemical information from rabbit PF at different PMIs. The PMI-dependent spectral signature was determined by two-dimensional (2D) correlation analysis. The partial least square (PLS) and nu-support vector machine (nu-SVM) models were then established based on the acquired spectral dataset. Spectral variables associated with amide I, amide II, COO(−), C-H bending, and C-O or C-OH vibrations arising from proteins, polypeptides, amino acids and carbohydrates, respectively, were susceptible to PMI in 2D correlation analysis. Moreover, the nu-SVM model appeared to achieve a more satisfactory prediction than the PLS model in calibration; the reliability of both models was determined in an external validation set. The study shows the possibility of application of ATR-FTIR methods in postmortem interval estimation using PF samples. Nature Publishing Group UK 2017-12-21 /pmc/articles/PMC5740144/ /pubmed/29269843 http://dx.doi.org/10.1038/s41598-017-18228-7 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Zhang, Ji
Li, Bing
Wang, Qi
Wei, Xin
Feng, Weibo
Chen, Yijiu
Huang, Ping
Wang, Zhenyuan
Application of Fourier transform infrared spectroscopy with chemometrics on postmortem interval estimation based on pericardial fluids
title Application of Fourier transform infrared spectroscopy with chemometrics on postmortem interval estimation based on pericardial fluids
title_full Application of Fourier transform infrared spectroscopy with chemometrics on postmortem interval estimation based on pericardial fluids
title_fullStr Application of Fourier transform infrared spectroscopy with chemometrics on postmortem interval estimation based on pericardial fluids
title_full_unstemmed Application of Fourier transform infrared spectroscopy with chemometrics on postmortem interval estimation based on pericardial fluids
title_short Application of Fourier transform infrared spectroscopy with chemometrics on postmortem interval estimation based on pericardial fluids
title_sort application of fourier transform infrared spectroscopy with chemometrics on postmortem interval estimation based on pericardial fluids
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5740144/
https://www.ncbi.nlm.nih.gov/pubmed/29269843
http://dx.doi.org/10.1038/s41598-017-18228-7
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