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Natural language processing: put your model where your mouth is

Molecular mechanisms are often described using “word models”—phrases intended to capture the interactions in a biological process. In their recent work, Sorger and colleagues (Gyori et al, 2017) provide a framework for converting word models into computational structures that can be simulated and co...

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Detalles Bibliográficos
Autores principales: Haggerty, Rachel A, Purvis, Jeremy E
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5740497/
https://www.ncbi.nlm.nih.gov/pubmed/29254950
http://dx.doi.org/10.15252/msb.20178077
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author Haggerty, Rachel A
Purvis, Jeremy E
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Purvis, Jeremy E
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description Molecular mechanisms are often described using “word models”—phrases intended to capture the interactions in a biological process. In their recent work, Sorger and colleagues (Gyori et al, 2017) provide a framework for converting word models into computational structures that can be simulated and compared to experimental data. By codifying word‐based descriptions of molecular phenomena, scientific communities can better evaluate, compare, and share mechanistic insights.
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spelling pubmed-57404972018-01-02 Natural language processing: put your model where your mouth is Haggerty, Rachel A Purvis, Jeremy E Mol Syst Biol News & Views Molecular mechanisms are often described using “word models”—phrases intended to capture the interactions in a biological process. In their recent work, Sorger and colleagues (Gyori et al, 2017) provide a framework for converting word models into computational structures that can be simulated and compared to experimental data. By codifying word‐based descriptions of molecular phenomena, scientific communities can better evaluate, compare, and share mechanistic insights. John Wiley and Sons Inc. 2017-12-18 /pmc/articles/PMC5740497/ /pubmed/29254950 http://dx.doi.org/10.15252/msb.20178077 Text en © 2017 The Authors. Published under the terms of the CC BY 4.0 license This is an open access article under the terms of the Creative Commons Attribution 4.0 (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle News & Views
Haggerty, Rachel A
Purvis, Jeremy E
Natural language processing: put your model where your mouth is
title Natural language processing: put your model where your mouth is
title_full Natural language processing: put your model where your mouth is
title_fullStr Natural language processing: put your model where your mouth is
title_full_unstemmed Natural language processing: put your model where your mouth is
title_short Natural language processing: put your model where your mouth is
title_sort natural language processing: put your model where your mouth is
topic News & Views
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5740497/
https://www.ncbi.nlm.nih.gov/pubmed/29254950
http://dx.doi.org/10.15252/msb.20178077
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