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Comparative analysis of serum proteome in congenital scoliosis patients with TBX6 haploinsufficiency – a first report pointing to lipid metabolism
Congenital scoliosis (CS) is a three‐dimensional deformity of the spine affecting quality of life. We have demonstrated TBX6 haploinsufficiency is the most important contributor to CS. However, the pathophysiology at the protein level remains unclear. Therefore, this study was to explore the differe...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5742745/ https://www.ncbi.nlm.nih.gov/pubmed/28944995 http://dx.doi.org/10.1111/jcmm.13341 |
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author | Zhu, Qiankun Wu, Nan Liu, Gang Zhou, Yangzhong Liu, Sen Chen, Jun Liu, Jiaqi Zuo, Yuzhi Liu, Zhenlei Chen, Weisheng Chen, Yixin Chen, Jia Lin, Mao Zhao, Yanxue Yang, Yang Wang, Shensgru Yang, Xu Ma, Yufen Wang, Jian Chen, Xiaoli Zhang, Jianguo Shen, Jianxiong Wu, Zhihong Qiu, Guixing |
author_facet | Zhu, Qiankun Wu, Nan Liu, Gang Zhou, Yangzhong Liu, Sen Chen, Jun Liu, Jiaqi Zuo, Yuzhi Liu, Zhenlei Chen, Weisheng Chen, Yixin Chen, Jia Lin, Mao Zhao, Yanxue Yang, Yang Wang, Shensgru Yang, Xu Ma, Yufen Wang, Jian Chen, Xiaoli Zhang, Jianguo Shen, Jianxiong Wu, Zhihong Qiu, Guixing |
author_sort | Zhu, Qiankun |
collection | PubMed |
description | Congenital scoliosis (CS) is a three‐dimensional deformity of the spine affecting quality of life. We have demonstrated TBX6 haploinsufficiency is the most important contributor to CS. However, the pathophysiology at the protein level remains unclear. Therefore, this study was to explore the differential proteome in serum of CS patients with TBX6 haploinsufficiency. Sera from nine CS patients with TBX6 haploinsufficiency and nine age‐ and gender‐matched healthy controls were collected and analysed by isobaric tagged relative and absolute quantification (iTRAQ) labelling coupled with mass spectrometry (MS). In total, 277 proteins were detected and 20 proteins were designated as differentially expressed proteins, which were submitted to subsequent bioinformatics analysis. Gene Ontology classification analysis showed the biological process was primarily related to ‘cellular process’, molecular function ‘structural molecule activity’ and cellular component ‘extracellular region’. IPA analysis revealed ‘LXR/RXR activation’ was the top pathway, which is a crucial pathway in lipid metabolism. Hierarchical clustering analysis generated two clusters. In summary, this study is the first proteomic research to delineate the total and differential serum proteins in TBX6 haploinsufficiency‐caused CS. The proteins discovered in this experiment may serve as potential biomarkers for CS, and lipid metabolism might play important roles in the pathogenesis of CS. |
format | Online Article Text |
id | pubmed-5742745 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-57427452018-01-04 Comparative analysis of serum proteome in congenital scoliosis patients with TBX6 haploinsufficiency – a first report pointing to lipid metabolism Zhu, Qiankun Wu, Nan Liu, Gang Zhou, Yangzhong Liu, Sen Chen, Jun Liu, Jiaqi Zuo, Yuzhi Liu, Zhenlei Chen, Weisheng Chen, Yixin Chen, Jia Lin, Mao Zhao, Yanxue Yang, Yang Wang, Shensgru Yang, Xu Ma, Yufen Wang, Jian Chen, Xiaoli Zhang, Jianguo Shen, Jianxiong Wu, Zhihong Qiu, Guixing J Cell Mol Med Original Articles Congenital scoliosis (CS) is a three‐dimensional deformity of the spine affecting quality of life. We have demonstrated TBX6 haploinsufficiency is the most important contributor to CS. However, the pathophysiology at the protein level remains unclear. Therefore, this study was to explore the differential proteome in serum of CS patients with TBX6 haploinsufficiency. Sera from nine CS patients with TBX6 haploinsufficiency and nine age‐ and gender‐matched healthy controls were collected and analysed by isobaric tagged relative and absolute quantification (iTRAQ) labelling coupled with mass spectrometry (MS). In total, 277 proteins were detected and 20 proteins were designated as differentially expressed proteins, which were submitted to subsequent bioinformatics analysis. Gene Ontology classification analysis showed the biological process was primarily related to ‘cellular process’, molecular function ‘structural molecule activity’ and cellular component ‘extracellular region’. IPA analysis revealed ‘LXR/RXR activation’ was the top pathway, which is a crucial pathway in lipid metabolism. Hierarchical clustering analysis generated two clusters. In summary, this study is the first proteomic research to delineate the total and differential serum proteins in TBX6 haploinsufficiency‐caused CS. The proteins discovered in this experiment may serve as potential biomarkers for CS, and lipid metabolism might play important roles in the pathogenesis of CS. John Wiley and Sons Inc. 2017-09-25 2018-01 /pmc/articles/PMC5742745/ /pubmed/28944995 http://dx.doi.org/10.1111/jcmm.13341 Text en © 2017 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Zhu, Qiankun Wu, Nan Liu, Gang Zhou, Yangzhong Liu, Sen Chen, Jun Liu, Jiaqi Zuo, Yuzhi Liu, Zhenlei Chen, Weisheng Chen, Yixin Chen, Jia Lin, Mao Zhao, Yanxue Yang, Yang Wang, Shensgru Yang, Xu Ma, Yufen Wang, Jian Chen, Xiaoli Zhang, Jianguo Shen, Jianxiong Wu, Zhihong Qiu, Guixing Comparative analysis of serum proteome in congenital scoliosis patients with TBX6 haploinsufficiency – a first report pointing to lipid metabolism |
title | Comparative analysis of serum proteome in congenital scoliosis patients with TBX6 haploinsufficiency – a first report pointing to lipid metabolism |
title_full | Comparative analysis of serum proteome in congenital scoliosis patients with TBX6 haploinsufficiency – a first report pointing to lipid metabolism |
title_fullStr | Comparative analysis of serum proteome in congenital scoliosis patients with TBX6 haploinsufficiency – a first report pointing to lipid metabolism |
title_full_unstemmed | Comparative analysis of serum proteome in congenital scoliosis patients with TBX6 haploinsufficiency – a first report pointing to lipid metabolism |
title_short | Comparative analysis of serum proteome in congenital scoliosis patients with TBX6 haploinsufficiency – a first report pointing to lipid metabolism |
title_sort | comparative analysis of serum proteome in congenital scoliosis patients with tbx6 haploinsufficiency – a first report pointing to lipid metabolism |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5742745/ https://www.ncbi.nlm.nih.gov/pubmed/28944995 http://dx.doi.org/10.1111/jcmm.13341 |
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