Cargando…
DNA barcoding of reef brittle stars (Ophiuroidea, Echinodermata) from the southwestern Indian Ocean evolutionary hot spot of biodiversity
In anticipation of the current biodiversity crisis, it has become critical to rapidly and accurately assess biodiversity. DNA barcoding has proved efficient in facilitating the discovery and description of thousands of species and also provides insight into the dynamics of biodiversity. Here, we seq...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5743570/ https://www.ncbi.nlm.nih.gov/pubmed/29299292 http://dx.doi.org/10.1002/ece3.3554 |
_version_ | 1783288593530224640 |
---|---|
author | Boissin, Emilie Hoareau, Thierry Bernard Paulay, Gustav Bruggemann, J. Henrich |
author_facet | Boissin, Emilie Hoareau, Thierry Bernard Paulay, Gustav Bruggemann, J. Henrich |
author_sort | Boissin, Emilie |
collection | PubMed |
description | In anticipation of the current biodiversity crisis, it has become critical to rapidly and accurately assess biodiversity. DNA barcoding has proved efficient in facilitating the discovery and description of thousands of species and also provides insight into the dynamics of biodiversity. Here, we sequenced a portion of the mitochondrial cytochrome c oxidase subunit I (COI) gene from all morphospecies of reef brittle stars collected during a large‐scale biodiversity survey in the southwestern Indian Ocean (SWIO). Three methods of species delineation (Automatic Barcode Gap Discovery, Generalized Mixed Yule Coalescent model, and Bayesian Poisson Tree Processes) showed concordant results and revealed 51 shallow reef species in the region. Mean intraspecific genetic distances (0.005–0.064) and mean interspecific genetic distances within genera (0.056–0.316) were concordant with previous echinoderm studies. This study revealed that brittle‐star biodiversity is underestimated by 20% within SWIO and by >40% when including specimens from the Pacific Ocean. Results are discussed in terms of endemism, diversification processes, and conservation implications for the Indo‐West Pacific marine biodiversity. We emphasize the need to further our knowledge on biodiversity of invertebrate groups in peripheral areas. |
format | Online Article Text |
id | pubmed-5743570 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-57435702018-01-03 DNA barcoding of reef brittle stars (Ophiuroidea, Echinodermata) from the southwestern Indian Ocean evolutionary hot spot of biodiversity Boissin, Emilie Hoareau, Thierry Bernard Paulay, Gustav Bruggemann, J. Henrich Ecol Evol Original Research In anticipation of the current biodiversity crisis, it has become critical to rapidly and accurately assess biodiversity. DNA barcoding has proved efficient in facilitating the discovery and description of thousands of species and also provides insight into the dynamics of biodiversity. Here, we sequenced a portion of the mitochondrial cytochrome c oxidase subunit I (COI) gene from all morphospecies of reef brittle stars collected during a large‐scale biodiversity survey in the southwestern Indian Ocean (SWIO). Three methods of species delineation (Automatic Barcode Gap Discovery, Generalized Mixed Yule Coalescent model, and Bayesian Poisson Tree Processes) showed concordant results and revealed 51 shallow reef species in the region. Mean intraspecific genetic distances (0.005–0.064) and mean interspecific genetic distances within genera (0.056–0.316) were concordant with previous echinoderm studies. This study revealed that brittle‐star biodiversity is underestimated by 20% within SWIO and by >40% when including specimens from the Pacific Ocean. Results are discussed in terms of endemism, diversification processes, and conservation implications for the Indo‐West Pacific marine biodiversity. We emphasize the need to further our knowledge on biodiversity of invertebrate groups in peripheral areas. John Wiley and Sons Inc. 2017-11-19 /pmc/articles/PMC5743570/ /pubmed/29299292 http://dx.doi.org/10.1002/ece3.3554 Text en © 2017 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Boissin, Emilie Hoareau, Thierry Bernard Paulay, Gustav Bruggemann, J. Henrich DNA barcoding of reef brittle stars (Ophiuroidea, Echinodermata) from the southwestern Indian Ocean evolutionary hot spot of biodiversity |
title |
DNA barcoding of reef brittle stars (Ophiuroidea, Echinodermata) from the southwestern Indian Ocean evolutionary hot spot of biodiversity |
title_full |
DNA barcoding of reef brittle stars (Ophiuroidea, Echinodermata) from the southwestern Indian Ocean evolutionary hot spot of biodiversity |
title_fullStr |
DNA barcoding of reef brittle stars (Ophiuroidea, Echinodermata) from the southwestern Indian Ocean evolutionary hot spot of biodiversity |
title_full_unstemmed |
DNA barcoding of reef brittle stars (Ophiuroidea, Echinodermata) from the southwestern Indian Ocean evolutionary hot spot of biodiversity |
title_short |
DNA barcoding of reef brittle stars (Ophiuroidea, Echinodermata) from the southwestern Indian Ocean evolutionary hot spot of biodiversity |
title_sort | dna barcoding of reef brittle stars (ophiuroidea, echinodermata) from the southwestern indian ocean evolutionary hot spot of biodiversity |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5743570/ https://www.ncbi.nlm.nih.gov/pubmed/29299292 http://dx.doi.org/10.1002/ece3.3554 |
work_keys_str_mv | AT boissinemilie dnabarcodingofreefbrittlestarsophiuroideaechinodermatafromthesouthwesternindianoceanevolutionaryhotspotofbiodiversity AT hoareauthierrybernard dnabarcodingofreefbrittlestarsophiuroideaechinodermatafromthesouthwesternindianoceanevolutionaryhotspotofbiodiversity AT paulaygustav dnabarcodingofreefbrittlestarsophiuroideaechinodermatafromthesouthwesternindianoceanevolutionaryhotspotofbiodiversity AT bruggemannjhenrich dnabarcodingofreefbrittlestarsophiuroideaechinodermatafromthesouthwesternindianoceanevolutionaryhotspotofbiodiversity |