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A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies
This communication reports a further examination of venom gland transcripts and venom composition of the Mexican scorpion Thorellius atrox using RNA-seq and tandem mass spectrometry. The RNA-seq, which was performed with the Illumina protocol, yielded more than 20,000 assembled transcripts. Followin...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5744119/ https://www.ncbi.nlm.nih.gov/pubmed/29231872 http://dx.doi.org/10.3390/toxins9120399 |
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author | Romero-Gutierrez, Teresa Peguero-Sanchez, Esteban Cevallos, Miguel A. Batista, Cesar V. F. Ortiz, Ernesto Possani, Lourival D. |
author_facet | Romero-Gutierrez, Teresa Peguero-Sanchez, Esteban Cevallos, Miguel A. Batista, Cesar V. F. Ortiz, Ernesto Possani, Lourival D. |
author_sort | Romero-Gutierrez, Teresa |
collection | PubMed |
description | This communication reports a further examination of venom gland transcripts and venom composition of the Mexican scorpion Thorellius atrox using RNA-seq and tandem mass spectrometry. The RNA-seq, which was performed with the Illumina protocol, yielded more than 20,000 assembled transcripts. Following a database search and annotation strategy, 160 transcripts were identified, potentially coding for venom components. A novel sequence was identified that potentially codes for a peptide with similarity to spider ω-agatoxins, which act on voltage-gated calcium channels, not known before to exist in scorpion venoms. Analogous transcripts were found in other scorpion species. They could represent members of a new scorpion toxin family, here named omegascorpins. The mass fingerprint by LC-MS identified 135 individual venom components, five of which matched with the theoretical masses of putative peptides translated from the transcriptome. The LC-MS/MS de novo sequencing allowed to reconstruct and identify 42 proteins encoded by assembled transcripts, thus validating the transcriptome analysis. Earlier studies conducted with this scorpion venom permitted the identification of only twenty putative venom components. The present work performed with more powerful and modern omic technologies demonstrates the capacity of accomplishing a deeper characterization of scorpion venom components and the identification of novel molecules with potential applications in biomedicine and the study of ion channel physiology. |
format | Online Article Text |
id | pubmed-5744119 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-57441192017-12-31 A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies Romero-Gutierrez, Teresa Peguero-Sanchez, Esteban Cevallos, Miguel A. Batista, Cesar V. F. Ortiz, Ernesto Possani, Lourival D. Toxins (Basel) Article This communication reports a further examination of venom gland transcripts and venom composition of the Mexican scorpion Thorellius atrox using RNA-seq and tandem mass spectrometry. The RNA-seq, which was performed with the Illumina protocol, yielded more than 20,000 assembled transcripts. Following a database search and annotation strategy, 160 transcripts were identified, potentially coding for venom components. A novel sequence was identified that potentially codes for a peptide with similarity to spider ω-agatoxins, which act on voltage-gated calcium channels, not known before to exist in scorpion venoms. Analogous transcripts were found in other scorpion species. They could represent members of a new scorpion toxin family, here named omegascorpins. The mass fingerprint by LC-MS identified 135 individual venom components, five of which matched with the theoretical masses of putative peptides translated from the transcriptome. The LC-MS/MS de novo sequencing allowed to reconstruct and identify 42 proteins encoded by assembled transcripts, thus validating the transcriptome analysis. Earlier studies conducted with this scorpion venom permitted the identification of only twenty putative venom components. The present work performed with more powerful and modern omic technologies demonstrates the capacity of accomplishing a deeper characterization of scorpion venom components and the identification of novel molecules with potential applications in biomedicine and the study of ion channel physiology. MDPI 2017-12-12 /pmc/articles/PMC5744119/ /pubmed/29231872 http://dx.doi.org/10.3390/toxins9120399 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Romero-Gutierrez, Teresa Peguero-Sanchez, Esteban Cevallos, Miguel A. Batista, Cesar V. F. Ortiz, Ernesto Possani, Lourival D. A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies |
title | A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies |
title_full | A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies |
title_fullStr | A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies |
title_full_unstemmed | A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies |
title_short | A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies |
title_sort | deeper examination of thorellius atrox scorpion venom components with omic techonologies |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5744119/ https://www.ncbi.nlm.nih.gov/pubmed/29231872 http://dx.doi.org/10.3390/toxins9120399 |
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