Cargando…

A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies

This communication reports a further examination of venom gland transcripts and venom composition of the Mexican scorpion Thorellius atrox using RNA-seq and tandem mass spectrometry. The RNA-seq, which was performed with the Illumina protocol, yielded more than 20,000 assembled transcripts. Followin...

Descripción completa

Detalles Bibliográficos
Autores principales: Romero-Gutierrez, Teresa, Peguero-Sanchez, Esteban, Cevallos, Miguel A., Batista, Cesar V. F., Ortiz, Ernesto, Possani, Lourival D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5744119/
https://www.ncbi.nlm.nih.gov/pubmed/29231872
http://dx.doi.org/10.3390/toxins9120399
_version_ 1783288690709102592
author Romero-Gutierrez, Teresa
Peguero-Sanchez, Esteban
Cevallos, Miguel A.
Batista, Cesar V. F.
Ortiz, Ernesto
Possani, Lourival D.
author_facet Romero-Gutierrez, Teresa
Peguero-Sanchez, Esteban
Cevallos, Miguel A.
Batista, Cesar V. F.
Ortiz, Ernesto
Possani, Lourival D.
author_sort Romero-Gutierrez, Teresa
collection PubMed
description This communication reports a further examination of venom gland transcripts and venom composition of the Mexican scorpion Thorellius atrox using RNA-seq and tandem mass spectrometry. The RNA-seq, which was performed with the Illumina protocol, yielded more than 20,000 assembled transcripts. Following a database search and annotation strategy, 160 transcripts were identified, potentially coding for venom components. A novel sequence was identified that potentially codes for a peptide with similarity to spider ω-agatoxins, which act on voltage-gated calcium channels, not known before to exist in scorpion venoms. Analogous transcripts were found in other scorpion species. They could represent members of a new scorpion toxin family, here named omegascorpins. The mass fingerprint by LC-MS identified 135 individual venom components, five of which matched with the theoretical masses of putative peptides translated from the transcriptome. The LC-MS/MS de novo sequencing allowed to reconstruct and identify 42 proteins encoded by assembled transcripts, thus validating the transcriptome analysis. Earlier studies conducted with this scorpion venom permitted the identification of only twenty putative venom components. The present work performed with more powerful and modern omic technologies demonstrates the capacity of accomplishing a deeper characterization of scorpion venom components and the identification of novel molecules with potential applications in biomedicine and the study of ion channel physiology.
format Online
Article
Text
id pubmed-5744119
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-57441192017-12-31 A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies Romero-Gutierrez, Teresa Peguero-Sanchez, Esteban Cevallos, Miguel A. Batista, Cesar V. F. Ortiz, Ernesto Possani, Lourival D. Toxins (Basel) Article This communication reports a further examination of venom gland transcripts and venom composition of the Mexican scorpion Thorellius atrox using RNA-seq and tandem mass spectrometry. The RNA-seq, which was performed with the Illumina protocol, yielded more than 20,000 assembled transcripts. Following a database search and annotation strategy, 160 transcripts were identified, potentially coding for venom components. A novel sequence was identified that potentially codes for a peptide with similarity to spider ω-agatoxins, which act on voltage-gated calcium channels, not known before to exist in scorpion venoms. Analogous transcripts were found in other scorpion species. They could represent members of a new scorpion toxin family, here named omegascorpins. The mass fingerprint by LC-MS identified 135 individual venom components, five of which matched with the theoretical masses of putative peptides translated from the transcriptome. The LC-MS/MS de novo sequencing allowed to reconstruct and identify 42 proteins encoded by assembled transcripts, thus validating the transcriptome analysis. Earlier studies conducted with this scorpion venom permitted the identification of only twenty putative venom components. The present work performed with more powerful and modern omic technologies demonstrates the capacity of accomplishing a deeper characterization of scorpion venom components and the identification of novel molecules with potential applications in biomedicine and the study of ion channel physiology. MDPI 2017-12-12 /pmc/articles/PMC5744119/ /pubmed/29231872 http://dx.doi.org/10.3390/toxins9120399 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Romero-Gutierrez, Teresa
Peguero-Sanchez, Esteban
Cevallos, Miguel A.
Batista, Cesar V. F.
Ortiz, Ernesto
Possani, Lourival D.
A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies
title A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies
title_full A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies
title_fullStr A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies
title_full_unstemmed A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies
title_short A Deeper Examination of Thorellius atrox Scorpion Venom Components with Omic Techonologies
title_sort deeper examination of thorellius atrox scorpion venom components with omic techonologies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5744119/
https://www.ncbi.nlm.nih.gov/pubmed/29231872
http://dx.doi.org/10.3390/toxins9120399
work_keys_str_mv AT romerogutierrezteresa adeeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT peguerosanchezesteban adeeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT cevallosmiguela adeeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT batistacesarvf adeeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT ortizernesto adeeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT possanilourivald adeeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT romerogutierrezteresa deeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT peguerosanchezesteban deeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT cevallosmiguela deeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT batistacesarvf deeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT ortizernesto deeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies
AT possanilourivald deeperexaminationofthorelliusatroxscorpionvenomcomponentswithomictechonologies