Cargando…
NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver
Metabolites present in liver provide important clues regarding the physiological state of an organism. The aim of this work was to evaluate a protocol for high-throughput NMR-based analysis of polar and non-polar metabolites from a small quantity of liver tissue. We extracted the tissue with a metha...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5746741/ https://www.ncbi.nlm.nih.gov/pubmed/29144418 http://dx.doi.org/10.3390/metabo7040061 |
_version_ | 1783289157043355648 |
---|---|
author | Fathi, Fariba Brun, Antonio Rott, Katherine H. Falco Cobra, Paulo Tonelli, Marco Eghbalnia, Hamid R. Caviedes-Vidal, Enrique Karasov, William H. Markley, John L. |
author_facet | Fathi, Fariba Brun, Antonio Rott, Katherine H. Falco Cobra, Paulo Tonelli, Marco Eghbalnia, Hamid R. Caviedes-Vidal, Enrique Karasov, William H. Markley, John L. |
author_sort | Fathi, Fariba |
collection | PubMed |
description | Metabolites present in liver provide important clues regarding the physiological state of an organism. The aim of this work was to evaluate a protocol for high-throughput NMR-based analysis of polar and non-polar metabolites from a small quantity of liver tissue. We extracted the tissue with a methanol/chloroform/water mixture and isolated the polar metabolites from the methanol/water layer and the non-polar metabolites from the chloroform layer. Following drying, we re-solubilized the fractions for analysis with a 600 MHz NMR spectrometer equipped with a 1.7 mm cryogenic probe. In order to evaluate the feasibility of this protocol for metabolomics studies, we analyzed the metabolic profile of livers from house sparrow (Passer domesticus) nestlings raised on two different diets: livers from 10 nestlings raised on a high protein diet (HP) for 4 d and livers from 12 nestlings raised on the HP diet for 3 d and then switched to a high carbohydrate diet (HC) for 1 d. The protocol enabled the detection of 52 polar and nine non-polar metabolites in (1)H NMR spectra of the extracts. We analyzed the lipophilic metabolites by one-way ANOVA to assess statistically significant concentration differences between the two groups. The results of our studies demonstrate that the protocol described here can be exploited for high-throughput screening of small quantities of liver tissue (approx. 100 mg wet mass) obtainable from small animals. |
format | Online Article Text |
id | pubmed-5746741 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-57467412018-01-03 NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver Fathi, Fariba Brun, Antonio Rott, Katherine H. Falco Cobra, Paulo Tonelli, Marco Eghbalnia, Hamid R. Caviedes-Vidal, Enrique Karasov, William H. Markley, John L. Metabolites Communication Metabolites present in liver provide important clues regarding the physiological state of an organism. The aim of this work was to evaluate a protocol for high-throughput NMR-based analysis of polar and non-polar metabolites from a small quantity of liver tissue. We extracted the tissue with a methanol/chloroform/water mixture and isolated the polar metabolites from the methanol/water layer and the non-polar metabolites from the chloroform layer. Following drying, we re-solubilized the fractions for analysis with a 600 MHz NMR spectrometer equipped with a 1.7 mm cryogenic probe. In order to evaluate the feasibility of this protocol for metabolomics studies, we analyzed the metabolic profile of livers from house sparrow (Passer domesticus) nestlings raised on two different diets: livers from 10 nestlings raised on a high protein diet (HP) for 4 d and livers from 12 nestlings raised on the HP diet for 3 d and then switched to a high carbohydrate diet (HC) for 1 d. The protocol enabled the detection of 52 polar and nine non-polar metabolites in (1)H NMR spectra of the extracts. We analyzed the lipophilic metabolites by one-way ANOVA to assess statistically significant concentration differences between the two groups. The results of our studies demonstrate that the protocol described here can be exploited for high-throughput screening of small quantities of liver tissue (approx. 100 mg wet mass) obtainable from small animals. MDPI 2017-11-16 /pmc/articles/PMC5746741/ /pubmed/29144418 http://dx.doi.org/10.3390/metabo7040061 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Communication Fathi, Fariba Brun, Antonio Rott, Katherine H. Falco Cobra, Paulo Tonelli, Marco Eghbalnia, Hamid R. Caviedes-Vidal, Enrique Karasov, William H. Markley, John L. NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver |
title | NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver |
title_full | NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver |
title_fullStr | NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver |
title_full_unstemmed | NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver |
title_short | NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver |
title_sort | nmr-based identification of metabolites in polar and non-polar extracts of avian liver |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5746741/ https://www.ncbi.nlm.nih.gov/pubmed/29144418 http://dx.doi.org/10.3390/metabo7040061 |
work_keys_str_mv | AT fathifariba nmrbasedidentificationofmetabolitesinpolarandnonpolarextractsofavianliver AT brunantonio nmrbasedidentificationofmetabolitesinpolarandnonpolarextractsofavianliver AT rottkatherineh nmrbasedidentificationofmetabolitesinpolarandnonpolarextractsofavianliver AT falcocobrapaulo nmrbasedidentificationofmetabolitesinpolarandnonpolarextractsofavianliver AT tonellimarco nmrbasedidentificationofmetabolitesinpolarandnonpolarextractsofavianliver AT eghbalniahamidr nmrbasedidentificationofmetabolitesinpolarandnonpolarextractsofavianliver AT caviedesvidalenrique nmrbasedidentificationofmetabolitesinpolarandnonpolarextractsofavianliver AT karasovwilliamh nmrbasedidentificationofmetabolitesinpolarandnonpolarextractsofavianliver AT markleyjohnl nmrbasedidentificationofmetabolitesinpolarandnonpolarextractsofavianliver |