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Metabolomic Profiles of a Midge (Procladius villosimanus, Kieffer) Are Associated with Sediment Contamination in Urban Wetlands
Metabolomic techniques are powerful tools for investigating organism-environment interactions. Metabolite profiles have the potential to identify exposure or toxicity before populations are disrupted and can provide useful information for environmental assessment. However, under complex environmenta...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5746744/ https://www.ncbi.nlm.nih.gov/pubmed/29258276 http://dx.doi.org/10.3390/metabo7040064 |
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author | Jeppe, Katherine J. Kouremenos, Konstantinos A. Townsend, Kallie R. MacMahon, Daniel F. Sharley, David Tull, Dedreia L. Hoffmann, Ary A. Pettigrove, Vincent Long, Sara M. |
author_facet | Jeppe, Katherine J. Kouremenos, Konstantinos A. Townsend, Kallie R. MacMahon, Daniel F. Sharley, David Tull, Dedreia L. Hoffmann, Ary A. Pettigrove, Vincent Long, Sara M. |
author_sort | Jeppe, Katherine J. |
collection | PubMed |
description | Metabolomic techniques are powerful tools for investigating organism-environment interactions. Metabolite profiles have the potential to identify exposure or toxicity before populations are disrupted and can provide useful information for environmental assessment. However, under complex environmental scenarios, metabolomic responses to exposure can be distorted by background and/or organismal variation. In the current study, we use LC-MS (liquid chromatography-mass spectrometry) and GC-MS (gas chromatography-mass spectrometry) to measure metabolites of the midge Procladius villosimanus inhabiting 21 urban wetlands. These metabolites were tested against common sediment contaminants using random forest models and metabolite enrichment analysis. Sediment contaminant concentrations in the field correlated with several P. villosimanus metabolites despite natural environmental and organismal variation. Furthermore, enrichment analysis indicated that metabolite sets implicated in stress responses were enriched, pointing to specific cellular functions affected by exposure. Methionine metabolism, sugar metabolism and glycerolipid metabolism associated with total petroleum hydrocarbon and metal concentrations, while mitochondrial electron transport and urea cycle sets associated only with bifenthrin. These results demonstrate the potential for metabolomics approaches to provide useful information in field-based environmental assessments. |
format | Online Article Text |
id | pubmed-5746744 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-57467442018-01-03 Metabolomic Profiles of a Midge (Procladius villosimanus, Kieffer) Are Associated with Sediment Contamination in Urban Wetlands Jeppe, Katherine J. Kouremenos, Konstantinos A. Townsend, Kallie R. MacMahon, Daniel F. Sharley, David Tull, Dedreia L. Hoffmann, Ary A. Pettigrove, Vincent Long, Sara M. Metabolites Article Metabolomic techniques are powerful tools for investigating organism-environment interactions. Metabolite profiles have the potential to identify exposure or toxicity before populations are disrupted and can provide useful information for environmental assessment. However, under complex environmental scenarios, metabolomic responses to exposure can be distorted by background and/or organismal variation. In the current study, we use LC-MS (liquid chromatography-mass spectrometry) and GC-MS (gas chromatography-mass spectrometry) to measure metabolites of the midge Procladius villosimanus inhabiting 21 urban wetlands. These metabolites were tested against common sediment contaminants using random forest models and metabolite enrichment analysis. Sediment contaminant concentrations in the field correlated with several P. villosimanus metabolites despite natural environmental and organismal variation. Furthermore, enrichment analysis indicated that metabolite sets implicated in stress responses were enriched, pointing to specific cellular functions affected by exposure. Methionine metabolism, sugar metabolism and glycerolipid metabolism associated with total petroleum hydrocarbon and metal concentrations, while mitochondrial electron transport and urea cycle sets associated only with bifenthrin. These results demonstrate the potential for metabolomics approaches to provide useful information in field-based environmental assessments. MDPI 2017-12-18 /pmc/articles/PMC5746744/ /pubmed/29258276 http://dx.doi.org/10.3390/metabo7040064 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Jeppe, Katherine J. Kouremenos, Konstantinos A. Townsend, Kallie R. MacMahon, Daniel F. Sharley, David Tull, Dedreia L. Hoffmann, Ary A. Pettigrove, Vincent Long, Sara M. Metabolomic Profiles of a Midge (Procladius villosimanus, Kieffer) Are Associated with Sediment Contamination in Urban Wetlands |
title | Metabolomic Profiles of a Midge (Procladius villosimanus, Kieffer) Are Associated with Sediment Contamination in Urban Wetlands |
title_full | Metabolomic Profiles of a Midge (Procladius villosimanus, Kieffer) Are Associated with Sediment Contamination in Urban Wetlands |
title_fullStr | Metabolomic Profiles of a Midge (Procladius villosimanus, Kieffer) Are Associated with Sediment Contamination in Urban Wetlands |
title_full_unstemmed | Metabolomic Profiles of a Midge (Procladius villosimanus, Kieffer) Are Associated with Sediment Contamination in Urban Wetlands |
title_short | Metabolomic Profiles of a Midge (Procladius villosimanus, Kieffer) Are Associated with Sediment Contamination in Urban Wetlands |
title_sort | metabolomic profiles of a midge (procladius villosimanus, kieffer) are associated with sediment contamination in urban wetlands |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5746744/ https://www.ncbi.nlm.nih.gov/pubmed/29258276 http://dx.doi.org/10.3390/metabo7040064 |
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