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Analysis of ARID2 Gene Mutation in Oral Squamous Cell Carcinoma
BACKGROUND: The ARID2 gene, encoding a sub unit of the chromatin remodelling complex, has a possible tumour suppressor function and has been found to be frequently mutated in various tumours, including gingivo buccal oral squamous cell carcinomas. The present study was designed to analyse the presen...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
West Asia Organization for Cancer Prevention
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5747389/ https://www.ncbi.nlm.nih.gov/pubmed/29072391 http://dx.doi.org/10.22034/APJCP.2017.18.10.2679 |
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author | Das, Lakshmi Prabha Pitty, Raghuram Hari Asokan, Kannan C-L, Krithika M-S, Anandi Ramanathan, Arvind |
author_facet | Das, Lakshmi Prabha Pitty, Raghuram Hari Asokan, Kannan C-L, Krithika M-S, Anandi Ramanathan, Arvind |
author_sort | Das, Lakshmi Prabha |
collection | PubMed |
description | BACKGROUND: The ARID2 gene, encoding a sub unit of the chromatin remodelling complex, has a possible tumour suppressor function and has been found to be frequently mutated in various tumours, including gingivo buccal oral squamous cell carcinomas. The present study was designed to analyse the presence of ARID2 gene mutations in the distinct genetic South Indian (Dravidian) population. MATERIALS AND METHODS: Genomic DNA from thirty biopsy tissue samples of histopathologically confirmed cases of oral squamous cell carcinoma (OSCC) were subjected to PCR amplification with intronic primers encompassing exons 19 and 20 of ARID2. Subsequently, the PCR amplicons were purified and subjected to Sanger sequencing using forward primers for analysis of mutational status. RESULTS: Our study yielded a 6% occurrence of mutations in the ARID2 gene among the thirty OSCC samples. Two samples showed a C(5174)A nonsense mutation whereby the “C” nucleotide was substituted with an “A” nucleotide at position 5174, resulting in the conversion of serine amino acid at codon 1725 to a premature STOP codon. CONCLUSION: Identification of ARID2 gene mutations in OSCCs in this distinct ethnic population reaffirms that aberrations in the chromatin remodelling complex could indeed also contribute to tumorigenesis, thus providing new insights for future research. |
format | Online Article Text |
id | pubmed-5747389 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | West Asia Organization for Cancer Prevention |
record_format | MEDLINE/PubMed |
spelling | pubmed-57473892018-02-21 Analysis of ARID2 Gene Mutation in Oral Squamous Cell Carcinoma Das, Lakshmi Prabha Pitty, Raghuram Hari Asokan, Kannan C-L, Krithika M-S, Anandi Ramanathan, Arvind Asian Pac J Cancer Prev Research Article BACKGROUND: The ARID2 gene, encoding a sub unit of the chromatin remodelling complex, has a possible tumour suppressor function and has been found to be frequently mutated in various tumours, including gingivo buccal oral squamous cell carcinomas. The present study was designed to analyse the presence of ARID2 gene mutations in the distinct genetic South Indian (Dravidian) population. MATERIALS AND METHODS: Genomic DNA from thirty biopsy tissue samples of histopathologically confirmed cases of oral squamous cell carcinoma (OSCC) were subjected to PCR amplification with intronic primers encompassing exons 19 and 20 of ARID2. Subsequently, the PCR amplicons were purified and subjected to Sanger sequencing using forward primers for analysis of mutational status. RESULTS: Our study yielded a 6% occurrence of mutations in the ARID2 gene among the thirty OSCC samples. Two samples showed a C(5174)A nonsense mutation whereby the “C” nucleotide was substituted with an “A” nucleotide at position 5174, resulting in the conversion of serine amino acid at codon 1725 to a premature STOP codon. CONCLUSION: Identification of ARID2 gene mutations in OSCCs in this distinct ethnic population reaffirms that aberrations in the chromatin remodelling complex could indeed also contribute to tumorigenesis, thus providing new insights for future research. West Asia Organization for Cancer Prevention 2017 /pmc/articles/PMC5747389/ /pubmed/29072391 http://dx.doi.org/10.22034/APJCP.2017.18.10.2679 Text en Copyright: © Asian Pacific Journal of Cancer Prevention http://creativecommons.org/licenses/BY-SA/4.0 This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License |
spellingShingle | Research Article Das, Lakshmi Prabha Pitty, Raghuram Hari Asokan, Kannan C-L, Krithika M-S, Anandi Ramanathan, Arvind Analysis of ARID2 Gene Mutation in Oral Squamous Cell Carcinoma |
title | Analysis of ARID2 Gene Mutation in Oral Squamous Cell Carcinoma |
title_full | Analysis of ARID2 Gene Mutation in Oral Squamous Cell Carcinoma |
title_fullStr | Analysis of ARID2 Gene Mutation in Oral Squamous Cell Carcinoma |
title_full_unstemmed | Analysis of ARID2 Gene Mutation in Oral Squamous Cell Carcinoma |
title_short | Analysis of ARID2 Gene Mutation in Oral Squamous Cell Carcinoma |
title_sort | analysis of arid2 gene mutation in oral squamous cell carcinoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5747389/ https://www.ncbi.nlm.nih.gov/pubmed/29072391 http://dx.doi.org/10.22034/APJCP.2017.18.10.2679 |
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