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Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01

Streptomyces kanasensis ZX01 produces some antibiotics and a glycoprotein with antiviral activity. To further evaluate its biosynthetic potential, here we sequenced the 7,026,279 bp draft genome of S. kanasensis ZX01 and analyzed all identifiable secondary gene clusters for controlling natural produ...

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Detalles Bibliográficos
Autores principales: Zhang, Guoqiang, Yu, Dailin, Sang, Bu, Feng, Juntao, Han, Lirong, Zhang, Xing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748664/
https://www.ncbi.nlm.nih.gov/pubmed/29189712
http://dx.doi.org/10.3390/genes8120346
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author Zhang, Guoqiang
Yu, Dailin
Sang, Bu
Feng, Juntao
Han, Lirong
Zhang, Xing
author_facet Zhang, Guoqiang
Yu, Dailin
Sang, Bu
Feng, Juntao
Han, Lirong
Zhang, Xing
author_sort Zhang, Guoqiang
collection PubMed
description Streptomyces kanasensis ZX01 produces some antibiotics and a glycoprotein with antiviral activity. To further evaluate its biosynthetic potential, here we sequenced the 7,026,279 bp draft genome of S. kanasensis ZX01 and analyzed all identifiable secondary gene clusters for controlling natural products. More than 60 putative clusters were found in S. kanasensis ZX01, the majority of these biosynthetic loci are novel. In addition, the regulators for secondary metabolism in S. kanasensis ZX01 were abundant. The global regulator nsdA not only controls biosynthesis of some antibiotics, but also enhances production of glycoprotein GP-1 with antiviral activity. This study importantly reveals the powerful interplay between genomic analysis and studies of traditional natural product purification/production increasing.
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spelling pubmed-57486642018-01-07 Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01 Zhang, Guoqiang Yu, Dailin Sang, Bu Feng, Juntao Han, Lirong Zhang, Xing Genes (Basel) Article Streptomyces kanasensis ZX01 produces some antibiotics and a glycoprotein with antiviral activity. To further evaluate its biosynthetic potential, here we sequenced the 7,026,279 bp draft genome of S. kanasensis ZX01 and analyzed all identifiable secondary gene clusters for controlling natural products. More than 60 putative clusters were found in S. kanasensis ZX01, the majority of these biosynthetic loci are novel. In addition, the regulators for secondary metabolism in S. kanasensis ZX01 were abundant. The global regulator nsdA not only controls biosynthesis of some antibiotics, but also enhances production of glycoprotein GP-1 with antiviral activity. This study importantly reveals the powerful interplay between genomic analysis and studies of traditional natural product purification/production increasing. MDPI 2017-11-30 /pmc/articles/PMC5748664/ /pubmed/29189712 http://dx.doi.org/10.3390/genes8120346 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Guoqiang
Yu, Dailin
Sang, Bu
Feng, Juntao
Han, Lirong
Zhang, Xing
Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01
title Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01
title_full Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01
title_fullStr Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01
title_full_unstemmed Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01
title_short Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01
title_sort genome-wide analysis reveals the secondary metabolome in streptomyces kanasensis zx01
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748664/
https://www.ncbi.nlm.nih.gov/pubmed/29189712
http://dx.doi.org/10.3390/genes8120346
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