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Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01
Streptomyces kanasensis ZX01 produces some antibiotics and a glycoprotein with antiviral activity. To further evaluate its biosynthetic potential, here we sequenced the 7,026,279 bp draft genome of S. kanasensis ZX01 and analyzed all identifiable secondary gene clusters for controlling natural produ...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748664/ https://www.ncbi.nlm.nih.gov/pubmed/29189712 http://dx.doi.org/10.3390/genes8120346 |
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author | Zhang, Guoqiang Yu, Dailin Sang, Bu Feng, Juntao Han, Lirong Zhang, Xing |
author_facet | Zhang, Guoqiang Yu, Dailin Sang, Bu Feng, Juntao Han, Lirong Zhang, Xing |
author_sort | Zhang, Guoqiang |
collection | PubMed |
description | Streptomyces kanasensis ZX01 produces some antibiotics and a glycoprotein with antiviral activity. To further evaluate its biosynthetic potential, here we sequenced the 7,026,279 bp draft genome of S. kanasensis ZX01 and analyzed all identifiable secondary gene clusters for controlling natural products. More than 60 putative clusters were found in S. kanasensis ZX01, the majority of these biosynthetic loci are novel. In addition, the regulators for secondary metabolism in S. kanasensis ZX01 were abundant. The global regulator nsdA not only controls biosynthesis of some antibiotics, but also enhances production of glycoprotein GP-1 with antiviral activity. This study importantly reveals the powerful interplay between genomic analysis and studies of traditional natural product purification/production increasing. |
format | Online Article Text |
id | pubmed-5748664 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-57486642018-01-07 Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01 Zhang, Guoqiang Yu, Dailin Sang, Bu Feng, Juntao Han, Lirong Zhang, Xing Genes (Basel) Article Streptomyces kanasensis ZX01 produces some antibiotics and a glycoprotein with antiviral activity. To further evaluate its biosynthetic potential, here we sequenced the 7,026,279 bp draft genome of S. kanasensis ZX01 and analyzed all identifiable secondary gene clusters for controlling natural products. More than 60 putative clusters were found in S. kanasensis ZX01, the majority of these biosynthetic loci are novel. In addition, the regulators for secondary metabolism in S. kanasensis ZX01 were abundant. The global regulator nsdA not only controls biosynthesis of some antibiotics, but also enhances production of glycoprotein GP-1 with antiviral activity. This study importantly reveals the powerful interplay between genomic analysis and studies of traditional natural product purification/production increasing. MDPI 2017-11-30 /pmc/articles/PMC5748664/ /pubmed/29189712 http://dx.doi.org/10.3390/genes8120346 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Guoqiang Yu, Dailin Sang, Bu Feng, Juntao Han, Lirong Zhang, Xing Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01 |
title | Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01 |
title_full | Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01 |
title_fullStr | Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01 |
title_full_unstemmed | Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01 |
title_short | Genome-Wide Analysis Reveals the Secondary Metabolome in Streptomyces kanasensis ZX01 |
title_sort | genome-wide analysis reveals the secondary metabolome in streptomyces kanasensis zx01 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748664/ https://www.ncbi.nlm.nih.gov/pubmed/29189712 http://dx.doi.org/10.3390/genes8120346 |
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