Cargando…
Functional Characterization of the Versatile MYB Gene Family Uncovered Their Important Roles in Plant Development and Responses to Drought and Waterlogging in Sesame
The MYB gene family constitutes one of the largest transcription factors (TFs) modulating various biological processes in plants. Although genome-wide analysis of this gene family has been carried out in some species, only three MYB members have been functionally characterized heretofore in sesame (...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748680/ https://www.ncbi.nlm.nih.gov/pubmed/29231869 http://dx.doi.org/10.3390/genes8120362 |
_version_ | 1783289447977058304 |
---|---|
author | Mmadi, Marie Ali Dossa, Komivi Wang, Linhai Zhou, Rong Wang, Yanyan Cisse, Ndiaga Sy, Mame Oureye Zhang, Xiurong |
author_facet | Mmadi, Marie Ali Dossa, Komivi Wang, Linhai Zhou, Rong Wang, Yanyan Cisse, Ndiaga Sy, Mame Oureye Zhang, Xiurong |
author_sort | Mmadi, Marie Ali |
collection | PubMed |
description | The MYB gene family constitutes one of the largest transcription factors (TFs) modulating various biological processes in plants. Although genome-wide analysis of this gene family has been carried out in some species, only three MYB members have been functionally characterized heretofore in sesame (Sesamum indicum L.). Here, we identified a relatively high number (287) of sesame MYB genes (SIMYBs) with an uncommon overrepresentation of the 1R-subfamily. A total of 95% of SIMYBs was mapped unevenly onto the 16 linkage groups of the sesame genome with 55 SIMYBs tandemly duplicated. In addition, molecular characterization, gene structure, and evolutionary relationships of SIMYBs were established. Based on the close relationship between sesame and Arabidopsis thaliana, we uncovered that the functions of SIMYBs are highly diverse. A total of 65% of SIMYBs were commonly detected in five tissues, suggesting that they represent key TFs modulating sesame growth and development. Moreover, we found that SIMYBs regulate sesame responses to drought and waterlogging, which highlights the potential of SIMYBs towards improving stress tolerance in sesame. This work presents a comprehensive picture of the MYB gene family in sesame and paves the way for further functional validation of the members of this versatile gene family. |
format | Online Article Text |
id | pubmed-5748680 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-57486802018-01-07 Functional Characterization of the Versatile MYB Gene Family Uncovered Their Important Roles in Plant Development and Responses to Drought and Waterlogging in Sesame Mmadi, Marie Ali Dossa, Komivi Wang, Linhai Zhou, Rong Wang, Yanyan Cisse, Ndiaga Sy, Mame Oureye Zhang, Xiurong Genes (Basel) Article The MYB gene family constitutes one of the largest transcription factors (TFs) modulating various biological processes in plants. Although genome-wide analysis of this gene family has been carried out in some species, only three MYB members have been functionally characterized heretofore in sesame (Sesamum indicum L.). Here, we identified a relatively high number (287) of sesame MYB genes (SIMYBs) with an uncommon overrepresentation of the 1R-subfamily. A total of 95% of SIMYBs was mapped unevenly onto the 16 linkage groups of the sesame genome with 55 SIMYBs tandemly duplicated. In addition, molecular characterization, gene structure, and evolutionary relationships of SIMYBs were established. Based on the close relationship between sesame and Arabidopsis thaliana, we uncovered that the functions of SIMYBs are highly diverse. A total of 65% of SIMYBs were commonly detected in five tissues, suggesting that they represent key TFs modulating sesame growth and development. Moreover, we found that SIMYBs regulate sesame responses to drought and waterlogging, which highlights the potential of SIMYBs towards improving stress tolerance in sesame. This work presents a comprehensive picture of the MYB gene family in sesame and paves the way for further functional validation of the members of this versatile gene family. MDPI 2017-12-12 /pmc/articles/PMC5748680/ /pubmed/29231869 http://dx.doi.org/10.3390/genes8120362 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Mmadi, Marie Ali Dossa, Komivi Wang, Linhai Zhou, Rong Wang, Yanyan Cisse, Ndiaga Sy, Mame Oureye Zhang, Xiurong Functional Characterization of the Versatile MYB Gene Family Uncovered Their Important Roles in Plant Development and Responses to Drought and Waterlogging in Sesame |
title | Functional Characterization of the Versatile MYB Gene Family Uncovered Their Important Roles in Plant Development and Responses to Drought and Waterlogging in Sesame |
title_full | Functional Characterization of the Versatile MYB Gene Family Uncovered Their Important Roles in Plant Development and Responses to Drought and Waterlogging in Sesame |
title_fullStr | Functional Characterization of the Versatile MYB Gene Family Uncovered Their Important Roles in Plant Development and Responses to Drought and Waterlogging in Sesame |
title_full_unstemmed | Functional Characterization of the Versatile MYB Gene Family Uncovered Their Important Roles in Plant Development and Responses to Drought and Waterlogging in Sesame |
title_short | Functional Characterization of the Versatile MYB Gene Family Uncovered Their Important Roles in Plant Development and Responses to Drought and Waterlogging in Sesame |
title_sort | functional characterization of the versatile myb gene family uncovered their important roles in plant development and responses to drought and waterlogging in sesame |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748680/ https://www.ncbi.nlm.nih.gov/pubmed/29231869 http://dx.doi.org/10.3390/genes8120362 |
work_keys_str_mv | AT mmadimarieali functionalcharacterizationoftheversatilemybgenefamilyuncoveredtheirimportantrolesinplantdevelopmentandresponsestodroughtandwaterlogginginsesame AT dossakomivi functionalcharacterizationoftheversatilemybgenefamilyuncoveredtheirimportantrolesinplantdevelopmentandresponsestodroughtandwaterlogginginsesame AT wanglinhai functionalcharacterizationoftheversatilemybgenefamilyuncoveredtheirimportantrolesinplantdevelopmentandresponsestodroughtandwaterlogginginsesame AT zhourong functionalcharacterizationoftheversatilemybgenefamilyuncoveredtheirimportantrolesinplantdevelopmentandresponsestodroughtandwaterlogginginsesame AT wangyanyan functionalcharacterizationoftheversatilemybgenefamilyuncoveredtheirimportantrolesinplantdevelopmentandresponsestodroughtandwaterlogginginsesame AT cissendiaga functionalcharacterizationoftheversatilemybgenefamilyuncoveredtheirimportantrolesinplantdevelopmentandresponsestodroughtandwaterlogginginsesame AT symameoureye functionalcharacterizationoftheversatilemybgenefamilyuncoveredtheirimportantrolesinplantdevelopmentandresponsestodroughtandwaterlogginginsesame AT zhangxiurong functionalcharacterizationoftheversatilemybgenefamilyuncoveredtheirimportantrolesinplantdevelopmentandresponsestodroughtandwaterlogginginsesame |