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The Genome of the Northern Sea Otter (Enhydra lutris kenyoni)
The northern sea otter inhabits coastal waters of the northern Pacific Ocean and is the largest member of the Mustelidae family. DNA sequencing methods that utilize microfluidic partitioned and non-partitioned library construction were used to establish the sea otter genome. The final assembly provi...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
MDPI
2017
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748697/ https://www.ncbi.nlm.nih.gov/pubmed/29232880 http://dx.doi.org/10.3390/genes8120379 |
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| author | Jones, Samantha J. Haulena, Martin Taylor, Gregory A. Chan, Simon Bilobram, Steven Warren, René L. Hammond, S. Austin Mungall, Karen L. Choo, Caleb Kirk, Heather Pandoh, Pawan Ally, Adrian Dhalla, Noreen Tam, Angela K. Y. Troussard, Armelle Paulino, Daniel Coope, Robin J. N. Mungall, Andrew J. Moore, Richard Zhao, Yongjun Birol, Inanc Ma, Yussanne Marra, Marco Jones, Steven J. M. |
| author_facet | Jones, Samantha J. Haulena, Martin Taylor, Gregory A. Chan, Simon Bilobram, Steven Warren, René L. Hammond, S. Austin Mungall, Karen L. Choo, Caleb Kirk, Heather Pandoh, Pawan Ally, Adrian Dhalla, Noreen Tam, Angela K. Y. Troussard, Armelle Paulino, Daniel Coope, Robin J. N. Mungall, Andrew J. Moore, Richard Zhao, Yongjun Birol, Inanc Ma, Yussanne Marra, Marco Jones, Steven J. M. |
| author_sort | Jones, Samantha J. |
| collection | PubMed |
| description | The northern sea otter inhabits coastal waters of the northern Pacific Ocean and is the largest member of the Mustelidae family. DNA sequencing methods that utilize microfluidic partitioned and non-partitioned library construction were used to establish the sea otter genome. The final assembly provided 2.426 Gbp of highly contiguous assembled genomic sequences with a scaffold N50 length of over 38 Mbp. We generated transcriptome data derived from a lymphoma to aid in the determination of functional elements. The assembled genome sequence and underlying sequence data are available at the National Center for Biotechnology Information (NCBI) under the BioProject accession number PRJNA388419. |
| format | Online Article Text |
| id | pubmed-5748697 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2017 |
| publisher | MDPI |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-57486972018-01-07 The Genome of the Northern Sea Otter (Enhydra lutris kenyoni) Jones, Samantha J. Haulena, Martin Taylor, Gregory A. Chan, Simon Bilobram, Steven Warren, René L. Hammond, S. Austin Mungall, Karen L. Choo, Caleb Kirk, Heather Pandoh, Pawan Ally, Adrian Dhalla, Noreen Tam, Angela K. Y. Troussard, Armelle Paulino, Daniel Coope, Robin J. N. Mungall, Andrew J. Moore, Richard Zhao, Yongjun Birol, Inanc Ma, Yussanne Marra, Marco Jones, Steven J. M. Genes (Basel) Article The northern sea otter inhabits coastal waters of the northern Pacific Ocean and is the largest member of the Mustelidae family. DNA sequencing methods that utilize microfluidic partitioned and non-partitioned library construction were used to establish the sea otter genome. The final assembly provided 2.426 Gbp of highly contiguous assembled genomic sequences with a scaffold N50 length of over 38 Mbp. We generated transcriptome data derived from a lymphoma to aid in the determination of functional elements. The assembled genome sequence and underlying sequence data are available at the National Center for Biotechnology Information (NCBI) under the BioProject accession number PRJNA388419. MDPI 2017-12-11 /pmc/articles/PMC5748697/ /pubmed/29232880 http://dx.doi.org/10.3390/genes8120379 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
| spellingShingle | Article Jones, Samantha J. Haulena, Martin Taylor, Gregory A. Chan, Simon Bilobram, Steven Warren, René L. Hammond, S. Austin Mungall, Karen L. Choo, Caleb Kirk, Heather Pandoh, Pawan Ally, Adrian Dhalla, Noreen Tam, Angela K. Y. Troussard, Armelle Paulino, Daniel Coope, Robin J. N. Mungall, Andrew J. Moore, Richard Zhao, Yongjun Birol, Inanc Ma, Yussanne Marra, Marco Jones, Steven J. M. The Genome of the Northern Sea Otter (Enhydra lutris kenyoni) |
| title | The Genome of the Northern Sea Otter (Enhydra lutris kenyoni) |
| title_full | The Genome of the Northern Sea Otter (Enhydra lutris kenyoni) |
| title_fullStr | The Genome of the Northern Sea Otter (Enhydra lutris kenyoni) |
| title_full_unstemmed | The Genome of the Northern Sea Otter (Enhydra lutris kenyoni) |
| title_short | The Genome of the Northern Sea Otter (Enhydra lutris kenyoni) |
| title_sort | genome of the northern sea otter (enhydra lutris kenyoni) |
| topic | Article |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5748697/ https://www.ncbi.nlm.nih.gov/pubmed/29232880 http://dx.doi.org/10.3390/genes8120379 |
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