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Genome-Wide Identification, Evolutionary and Expression Analyses of the GALACTINOL SYNTHASE Gene Family in Rapeseed and Tobacco

Galactinol synthase (GolS) is a key enzyme in raffinose family oligosaccharide (RFO) biosynthesis. The finding that GolS accumulates in plants exposed to abiotic stresses indicates RFOs function in environmental adaptation. However, the evolutionary relationships and biological functions of GolS fam...

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Autores principales: Fan, Yonghai, Yu, Mengna, Liu, Miao, Zhang, Rui, Sun, Wei, Qian, Mingchao, Duan, Huichun, Chang, Wei, Ma, Jinqi, Qu, Cunmin, Zhang, Kai, Lei, Bo, Lu, Kun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5751367/
https://www.ncbi.nlm.nih.gov/pubmed/29261107
http://dx.doi.org/10.3390/ijms18122768
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author Fan, Yonghai
Yu, Mengna
Liu, Miao
Zhang, Rui
Sun, Wei
Qian, Mingchao
Duan, Huichun
Chang, Wei
Ma, Jinqi
Qu, Cunmin
Zhang, Kai
Lei, Bo
Lu, Kun
author_facet Fan, Yonghai
Yu, Mengna
Liu, Miao
Zhang, Rui
Sun, Wei
Qian, Mingchao
Duan, Huichun
Chang, Wei
Ma, Jinqi
Qu, Cunmin
Zhang, Kai
Lei, Bo
Lu, Kun
author_sort Fan, Yonghai
collection PubMed
description Galactinol synthase (GolS) is a key enzyme in raffinose family oligosaccharide (RFO) biosynthesis. The finding that GolS accumulates in plants exposed to abiotic stresses indicates RFOs function in environmental adaptation. However, the evolutionary relationships and biological functions of GolS family in rapeseed (Brassica napus) and tobacco (Nicotiana tabacum) remain unclear. In this study, we identified 20 BnGolS and 9 NtGolS genes. Subcellular localization predictions showed that most of the proteins are localized to the cytoplasm. Phylogenetic analysis identified a lost event of an ancient GolS copy in the Solanaceae and an ancient duplication event leading to evolution of GolS4/7 in the Brassicaceae. The three-dimensional structures of two GolS proteins were conserved, with an important DxD motif for binding to UDP-galactose (uridine diphosphate-galactose) and inositol. Expression profile analysis indicated that BnGolS and NtGolS genes were expressed in most tissues and highly expressed in one or two specific tissues. Hormone treatments strongly induced the expression of most BnGolS genes and homologous genes in the same subfamilies exhibited divergent-induced expression. Our study provides a comprehensive evolutionary analysis of GolS genes among the Brassicaceae and Solanaceae as well as an insight into the biological function of GolS genes in hormone response in plants.
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spelling pubmed-57513672018-01-08 Genome-Wide Identification, Evolutionary and Expression Analyses of the GALACTINOL SYNTHASE Gene Family in Rapeseed and Tobacco Fan, Yonghai Yu, Mengna Liu, Miao Zhang, Rui Sun, Wei Qian, Mingchao Duan, Huichun Chang, Wei Ma, Jinqi Qu, Cunmin Zhang, Kai Lei, Bo Lu, Kun Int J Mol Sci Article Galactinol synthase (GolS) is a key enzyme in raffinose family oligosaccharide (RFO) biosynthesis. The finding that GolS accumulates in plants exposed to abiotic stresses indicates RFOs function in environmental adaptation. However, the evolutionary relationships and biological functions of GolS family in rapeseed (Brassica napus) and tobacco (Nicotiana tabacum) remain unclear. In this study, we identified 20 BnGolS and 9 NtGolS genes. Subcellular localization predictions showed that most of the proteins are localized to the cytoplasm. Phylogenetic analysis identified a lost event of an ancient GolS copy in the Solanaceae and an ancient duplication event leading to evolution of GolS4/7 in the Brassicaceae. The three-dimensional structures of two GolS proteins were conserved, with an important DxD motif for binding to UDP-galactose (uridine diphosphate-galactose) and inositol. Expression profile analysis indicated that BnGolS and NtGolS genes were expressed in most tissues and highly expressed in one or two specific tissues. Hormone treatments strongly induced the expression of most BnGolS genes and homologous genes in the same subfamilies exhibited divergent-induced expression. Our study provides a comprehensive evolutionary analysis of GolS genes among the Brassicaceae and Solanaceae as well as an insight into the biological function of GolS genes in hormone response in plants. MDPI 2017-12-20 /pmc/articles/PMC5751367/ /pubmed/29261107 http://dx.doi.org/10.3390/ijms18122768 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Fan, Yonghai
Yu, Mengna
Liu, Miao
Zhang, Rui
Sun, Wei
Qian, Mingchao
Duan, Huichun
Chang, Wei
Ma, Jinqi
Qu, Cunmin
Zhang, Kai
Lei, Bo
Lu, Kun
Genome-Wide Identification, Evolutionary and Expression Analyses of the GALACTINOL SYNTHASE Gene Family in Rapeseed and Tobacco
title Genome-Wide Identification, Evolutionary and Expression Analyses of the GALACTINOL SYNTHASE Gene Family in Rapeseed and Tobacco
title_full Genome-Wide Identification, Evolutionary and Expression Analyses of the GALACTINOL SYNTHASE Gene Family in Rapeseed and Tobacco
title_fullStr Genome-Wide Identification, Evolutionary and Expression Analyses of the GALACTINOL SYNTHASE Gene Family in Rapeseed and Tobacco
title_full_unstemmed Genome-Wide Identification, Evolutionary and Expression Analyses of the GALACTINOL SYNTHASE Gene Family in Rapeseed and Tobacco
title_short Genome-Wide Identification, Evolutionary and Expression Analyses of the GALACTINOL SYNTHASE Gene Family in Rapeseed and Tobacco
title_sort genome-wide identification, evolutionary and expression analyses of the galactinol synthase gene family in rapeseed and tobacco
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5751367/
https://www.ncbi.nlm.nih.gov/pubmed/29261107
http://dx.doi.org/10.3390/ijms18122768
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