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Development of Spectral Disease Indices for ‘Flavescence Dorée’ Grapevine Disease Identification

Spectral measurements are employed in many precision agriculture applications, due to their ability to monitor the vegetation’s health state. Spectral vegetation indices are one of the main techniques currently used in remote sensing activities, since they are related to biophysical and biochemical...

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Autores principales: AL-Saddik, Hania, Simon, Jean-Claude, Cointault, Frederic
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5751714/
https://www.ncbi.nlm.nih.gov/pubmed/29186057
http://dx.doi.org/10.3390/s17122772
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author AL-Saddik, Hania
Simon, Jean-Claude
Cointault, Frederic
author_facet AL-Saddik, Hania
Simon, Jean-Claude
Cointault, Frederic
author_sort AL-Saddik, Hania
collection PubMed
description Spectral measurements are employed in many precision agriculture applications, due to their ability to monitor the vegetation’s health state. Spectral vegetation indices are one of the main techniques currently used in remote sensing activities, since they are related to biophysical and biochemical crop variables. Moreover, they have been evaluated in some studies as potentially beneficial for detecting or differentiating crop diseases. Flavescence Dorée (FD) is an infectious, incurable disease of the grapevine that can produce severe yield losses and, hence, compromise the stability of the vineyards. The aim of this study was to develop specific spectral disease indices (SDIs) for the detection of FD disease in grapevines. Spectral signatures of healthy and diseased grapevine leaves were measured with a non-imaging spectro-radiometer at two infection severity levels. The most discriminating wavelengths were selected by a genetic algorithm (GA) feature selection tool, the Spectral Disease Indices (SDIs) are designed by exhaustively testing all possible combinations of wavelengths chosen. The best weighted combination of a single wavelength and a normalized difference is chosen to create the index. The SDIs are tested for their ability to differentiate healthy from diseased vine leaves and they are compared to some common set of Spectral Vegetation Indices (SVIs). It was demonstrated that using vegetation indices was, in general, better than using complete spectral data and that SDIs specifically designed for FD performed better than traditional SVIs in most of cases. The precision of the classification is higher than 90%. This study demonstrates that SDIs have the potential to improve disease detection, identification and monitoring in precision agriculture applications.
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spelling pubmed-57517142018-01-10 Development of Spectral Disease Indices for ‘Flavescence Dorée’ Grapevine Disease Identification AL-Saddik, Hania Simon, Jean-Claude Cointault, Frederic Sensors (Basel) Article Spectral measurements are employed in many precision agriculture applications, due to their ability to monitor the vegetation’s health state. Spectral vegetation indices are one of the main techniques currently used in remote sensing activities, since they are related to biophysical and biochemical crop variables. Moreover, they have been evaluated in some studies as potentially beneficial for detecting or differentiating crop diseases. Flavescence Dorée (FD) is an infectious, incurable disease of the grapevine that can produce severe yield losses and, hence, compromise the stability of the vineyards. The aim of this study was to develop specific spectral disease indices (SDIs) for the detection of FD disease in grapevines. Spectral signatures of healthy and diseased grapevine leaves were measured with a non-imaging spectro-radiometer at two infection severity levels. The most discriminating wavelengths were selected by a genetic algorithm (GA) feature selection tool, the Spectral Disease Indices (SDIs) are designed by exhaustively testing all possible combinations of wavelengths chosen. The best weighted combination of a single wavelength and a normalized difference is chosen to create the index. The SDIs are tested for their ability to differentiate healthy from diseased vine leaves and they are compared to some common set of Spectral Vegetation Indices (SVIs). It was demonstrated that using vegetation indices was, in general, better than using complete spectral data and that SDIs specifically designed for FD performed better than traditional SVIs in most of cases. The precision of the classification is higher than 90%. This study demonstrates that SDIs have the potential to improve disease detection, identification and monitoring in precision agriculture applications. MDPI 2017-11-29 /pmc/articles/PMC5751714/ /pubmed/29186057 http://dx.doi.org/10.3390/s17122772 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
AL-Saddik, Hania
Simon, Jean-Claude
Cointault, Frederic
Development of Spectral Disease Indices for ‘Flavescence Dorée’ Grapevine Disease Identification
title Development of Spectral Disease Indices for ‘Flavescence Dorée’ Grapevine Disease Identification
title_full Development of Spectral Disease Indices for ‘Flavescence Dorée’ Grapevine Disease Identification
title_fullStr Development of Spectral Disease Indices for ‘Flavescence Dorée’ Grapevine Disease Identification
title_full_unstemmed Development of Spectral Disease Indices for ‘Flavescence Dorée’ Grapevine Disease Identification
title_short Development of Spectral Disease Indices for ‘Flavescence Dorée’ Grapevine Disease Identification
title_sort development of spectral disease indices for ‘flavescence dorée’ grapevine disease identification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5751714/
https://www.ncbi.nlm.nih.gov/pubmed/29186057
http://dx.doi.org/10.3390/s17122772
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