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Development and validation of a machine learning-based predictive model to improve the prediction of inguinal status of anal cancer patients: A preliminary report

INTRODUCTION: The role of prophylactic inguinal irradiation (PII) in the treatment of anal cancer patients is controversial. We developped an innovative algorithm based on the Machine Learning (ML) allowing the tailoring of the prescription of PII. RESULTS: Once verified on the independent testing s...

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Autores principales: De Bari, Berardino, Vallati, Mauro, Gatta, Roberto, Lestrade, Laëtitia, Manfrida, Stefania, Carrie, Christian, Valentini, Vincenzo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5752460/
https://www.ncbi.nlm.nih.gov/pubmed/29312547
http://dx.doi.org/10.18632/oncotarget.10749
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author De Bari, Berardino
Vallati, Mauro
Gatta, Roberto
Lestrade, Laëtitia
Manfrida, Stefania
Carrie, Christian
Valentini, Vincenzo
author_facet De Bari, Berardino
Vallati, Mauro
Gatta, Roberto
Lestrade, Laëtitia
Manfrida, Stefania
Carrie, Christian
Valentini, Vincenzo
author_sort De Bari, Berardino
collection PubMed
description INTRODUCTION: The role of prophylactic inguinal irradiation (PII) in the treatment of anal cancer patients is controversial. We developped an innovative algorithm based on the Machine Learning (ML) allowing the tailoring of the prescription of PII. RESULTS: Once verified on the independent testing set, J48 showed the better performances, with specificity, sensitivity, and accuracy rates in predicting relapsing patients of 86.4%, 50.0% and 83.1% respectively (vs 36.5%, 90.4% and 80.25%, respectively, for LR). METHODS: We classified 194 anal cancer patients with Logistic Regression (LR) and other 3 ML techniques based on decision trees (J48, Random Tree and Random Forest), using a large set of clinical and therapeutic variables. We tested obtained ML algorithms on an independent testing set of 65 anal cancer patients. TRIPOD (Transparent Reporting of a multivariable prediction model for Individual Prognosis or Diagnosis) methodology was used for the development, the Quality Assurance and the description of the experimental procedures. CONCLUSION: In an internationally approved quality assurance framework, ML seems promising in predicting the outcome of patients that would benefit or not of the PII. Once confirmed in larger and/or multi-centric databases, ML could support the physician in tailoring the treatment and in deciding if deliver or not the PII.
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spelling pubmed-57524602018-01-08 Development and validation of a machine learning-based predictive model to improve the prediction of inguinal status of anal cancer patients: A preliminary report De Bari, Berardino Vallati, Mauro Gatta, Roberto Lestrade, Laëtitia Manfrida, Stefania Carrie, Christian Valentini, Vincenzo Oncotarget Research Paper INTRODUCTION: The role of prophylactic inguinal irradiation (PII) in the treatment of anal cancer patients is controversial. We developped an innovative algorithm based on the Machine Learning (ML) allowing the tailoring of the prescription of PII. RESULTS: Once verified on the independent testing set, J48 showed the better performances, with specificity, sensitivity, and accuracy rates in predicting relapsing patients of 86.4%, 50.0% and 83.1% respectively (vs 36.5%, 90.4% and 80.25%, respectively, for LR). METHODS: We classified 194 anal cancer patients with Logistic Regression (LR) and other 3 ML techniques based on decision trees (J48, Random Tree and Random Forest), using a large set of clinical and therapeutic variables. We tested obtained ML algorithms on an independent testing set of 65 anal cancer patients. TRIPOD (Transparent Reporting of a multivariable prediction model for Individual Prognosis or Diagnosis) methodology was used for the development, the Quality Assurance and the description of the experimental procedures. CONCLUSION: In an internationally approved quality assurance framework, ML seems promising in predicting the outcome of patients that would benefit or not of the PII. Once confirmed in larger and/or multi-centric databases, ML could support the physician in tailoring the treatment and in deciding if deliver or not the PII. Impact Journals LLC 2016-07-21 /pmc/articles/PMC5752460/ /pubmed/29312547 http://dx.doi.org/10.18632/oncotarget.10749 Text en Copyright: © 2017 Bari et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
De Bari, Berardino
Vallati, Mauro
Gatta, Roberto
Lestrade, Laëtitia
Manfrida, Stefania
Carrie, Christian
Valentini, Vincenzo
Development and validation of a machine learning-based predictive model to improve the prediction of inguinal status of anal cancer patients: A preliminary report
title Development and validation of a machine learning-based predictive model to improve the prediction of inguinal status of anal cancer patients: A preliminary report
title_full Development and validation of a machine learning-based predictive model to improve the prediction of inguinal status of anal cancer patients: A preliminary report
title_fullStr Development and validation of a machine learning-based predictive model to improve the prediction of inguinal status of anal cancer patients: A preliminary report
title_full_unstemmed Development and validation of a machine learning-based predictive model to improve the prediction of inguinal status of anal cancer patients: A preliminary report
title_short Development and validation of a machine learning-based predictive model to improve the prediction of inguinal status of anal cancer patients: A preliminary report
title_sort development and validation of a machine learning-based predictive model to improve the prediction of inguinal status of anal cancer patients: a preliminary report
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5752460/
https://www.ncbi.nlm.nih.gov/pubmed/29312547
http://dx.doi.org/10.18632/oncotarget.10749
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