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Human Ageing Genomic Resources: new and updated databases
In spite of a growing body of research and data, human ageing remains a poorly understood process. Over 10 years ago we developed the Human Ageing Genomic Resources (HAGR), a collection of databases and tools for studying the biology and genetics of ageing. Here, we present HAGR’s main functionaliti...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753192/ https://www.ncbi.nlm.nih.gov/pubmed/29121237 http://dx.doi.org/10.1093/nar/gkx1042 |
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author | Tacutu, Robi Thornton, Daniel Johnson, Emily Budovsky, Arie Barardo, Diogo Craig, Thomas Diana, Eugene Lehmann, Gilad Toren, Dmitri Wang, Jingwei Fraifeld, Vadim E de Magalhães, João P |
author_facet | Tacutu, Robi Thornton, Daniel Johnson, Emily Budovsky, Arie Barardo, Diogo Craig, Thomas Diana, Eugene Lehmann, Gilad Toren, Dmitri Wang, Jingwei Fraifeld, Vadim E de Magalhães, João P |
author_sort | Tacutu, Robi |
collection | PubMed |
description | In spite of a growing body of research and data, human ageing remains a poorly understood process. Over 10 years ago we developed the Human Ageing Genomic Resources (HAGR), a collection of databases and tools for studying the biology and genetics of ageing. Here, we present HAGR’s main functionalities, highlighting new additions and improvements. HAGR consists of six core databases: (i) the GenAge database of ageing-related genes, in turn composed of a dataset of >300 human ageing-related genes and a dataset with >2000 genes associated with ageing or longevity in model organisms; (ii) the AnAge database of animal ageing and longevity, featuring >4000 species; (iii) the GenDR database with >200 genes associated with the life-extending effects of dietary restriction; (iv) the LongevityMap database of human genetic association studies of longevity with >500 entries; (v) the DrugAge database with >400 ageing or longevity-associated drugs or compounds; (vi) the CellAge database with >200 genes associated with cell senescence. All our databases are manually curated by experts and regularly updated to ensure a high quality data. Cross-links across our databases and to external resources help researchers locate and integrate relevant information. HAGR is freely available online (http://genomics.senescence.info/). |
format | Online Article Text |
id | pubmed-5753192 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-57531922018-01-05 Human Ageing Genomic Resources: new and updated databases Tacutu, Robi Thornton, Daniel Johnson, Emily Budovsky, Arie Barardo, Diogo Craig, Thomas Diana, Eugene Lehmann, Gilad Toren, Dmitri Wang, Jingwei Fraifeld, Vadim E de Magalhães, João P Nucleic Acids Res Database Issue In spite of a growing body of research and data, human ageing remains a poorly understood process. Over 10 years ago we developed the Human Ageing Genomic Resources (HAGR), a collection of databases and tools for studying the biology and genetics of ageing. Here, we present HAGR’s main functionalities, highlighting new additions and improvements. HAGR consists of six core databases: (i) the GenAge database of ageing-related genes, in turn composed of a dataset of >300 human ageing-related genes and a dataset with >2000 genes associated with ageing or longevity in model organisms; (ii) the AnAge database of animal ageing and longevity, featuring >4000 species; (iii) the GenDR database with >200 genes associated with the life-extending effects of dietary restriction; (iv) the LongevityMap database of human genetic association studies of longevity with >500 entries; (v) the DrugAge database with >400 ageing or longevity-associated drugs or compounds; (vi) the CellAge database with >200 genes associated with cell senescence. All our databases are manually curated by experts and regularly updated to ensure a high quality data. Cross-links across our databases and to external resources help researchers locate and integrate relevant information. HAGR is freely available online (http://genomics.senescence.info/). Oxford University Press 2018-01-04 2017-11-07 /pmc/articles/PMC5753192/ /pubmed/29121237 http://dx.doi.org/10.1093/nar/gkx1042 Text en © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Issue Tacutu, Robi Thornton, Daniel Johnson, Emily Budovsky, Arie Barardo, Diogo Craig, Thomas Diana, Eugene Lehmann, Gilad Toren, Dmitri Wang, Jingwei Fraifeld, Vadim E de Magalhães, João P Human Ageing Genomic Resources: new and updated databases |
title | Human Ageing Genomic Resources: new and updated databases |
title_full | Human Ageing Genomic Resources: new and updated databases |
title_fullStr | Human Ageing Genomic Resources: new and updated databases |
title_full_unstemmed | Human Ageing Genomic Resources: new and updated databases |
title_short | Human Ageing Genomic Resources: new and updated databases |
title_sort | human ageing genomic resources: new and updated databases |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753192/ https://www.ncbi.nlm.nih.gov/pubmed/29121237 http://dx.doi.org/10.1093/nar/gkx1042 |
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