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Ensembl 2018

The Ensembl project has been aggregating, processing, integrating and redistributing genomic datasets since the initial releases of the draft human genome, with the aim of accelerating genomics research through rapid open distribution of public data. Large amounts of raw data are thus transformed in...

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Autores principales: Zerbino, Daniel R, Achuthan, Premanand, Akanni, Wasiu, Amode, M Ridwan, Barrell, Daniel, Bhai, Jyothish, Billis, Konstantinos, Cummins, Carla, Gall, Astrid, Girón, Carlos García, Gil, Laurent, Gordon, Leo, Haggerty, Leanne, Haskell, Erin, Hourlier, Thibaut, Izuogu, Osagie G, Janacek, Sophie H, Juettemann, Thomas, To, Jimmy Kiang, Laird, Matthew R, Lavidas, Ilias, Liu, Zhicheng, Loveland, Jane E, Maurel, Thomas, McLaren, William, Moore, Benjamin, Mudge, Jonathan, Murphy, Daniel N, Newman, Victoria, Nuhn, Michael, Ogeh, Denye, Ong, Chuang Kee, Parker, Anne, Patricio, Mateus, Riat, Harpreet Singh, Schuilenburg, Helen, Sheppard, Dan, Sparrow, Helen, Taylor, Kieron, Thormann, Anja, Vullo, Alessandro, Walts, Brandon, Zadissa, Amonida, Frankish, Adam, Hunt, Sarah E, Kostadima, Myrto, Langridge, Nicholas, Martin, Fergal J, Muffato, Matthieu, Perry, Emily, Ruffier, Magali, Staines, Dan M, Trevanion, Stephen J, Aken, Bronwen L, Cunningham, Fiona, Yates, Andrew, Flicek, Paul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753206/
https://www.ncbi.nlm.nih.gov/pubmed/29155950
http://dx.doi.org/10.1093/nar/gkx1098
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author Zerbino, Daniel R
Achuthan, Premanand
Akanni, Wasiu
Amode, M Ridwan
Barrell, Daniel
Bhai, Jyothish
Billis, Konstantinos
Cummins, Carla
Gall, Astrid
Girón, Carlos García
Gil, Laurent
Gordon, Leo
Haggerty, Leanne
Haskell, Erin
Hourlier, Thibaut
Izuogu, Osagie G
Janacek, Sophie H
Juettemann, Thomas
To, Jimmy Kiang
Laird, Matthew R
Lavidas, Ilias
Liu, Zhicheng
Loveland, Jane E
Maurel, Thomas
McLaren, William
Moore, Benjamin
Mudge, Jonathan
Murphy, Daniel N
Newman, Victoria
Nuhn, Michael
Ogeh, Denye
Ong, Chuang Kee
Parker, Anne
Patricio, Mateus
Riat, Harpreet Singh
Schuilenburg, Helen
Sheppard, Dan
Sparrow, Helen
Taylor, Kieron
Thormann, Anja
Vullo, Alessandro
Walts, Brandon
Zadissa, Amonida
Frankish, Adam
Hunt, Sarah E
Kostadima, Myrto
Langridge, Nicholas
Martin, Fergal J
Muffato, Matthieu
Perry, Emily
Ruffier, Magali
Staines, Dan M
Trevanion, Stephen J
Aken, Bronwen L
Cunningham, Fiona
Yates, Andrew
Flicek, Paul
author_facet Zerbino, Daniel R
Achuthan, Premanand
Akanni, Wasiu
Amode, M Ridwan
Barrell, Daniel
Bhai, Jyothish
Billis, Konstantinos
Cummins, Carla
Gall, Astrid
Girón, Carlos García
Gil, Laurent
Gordon, Leo
Haggerty, Leanne
Haskell, Erin
Hourlier, Thibaut
Izuogu, Osagie G
Janacek, Sophie H
Juettemann, Thomas
To, Jimmy Kiang
Laird, Matthew R
Lavidas, Ilias
Liu, Zhicheng
Loveland, Jane E
Maurel, Thomas
McLaren, William
Moore, Benjamin
Mudge, Jonathan
Murphy, Daniel N
Newman, Victoria
Nuhn, Michael
Ogeh, Denye
Ong, Chuang Kee
Parker, Anne
Patricio, Mateus
Riat, Harpreet Singh
Schuilenburg, Helen
Sheppard, Dan
Sparrow, Helen
Taylor, Kieron
Thormann, Anja
Vullo, Alessandro
Walts, Brandon
Zadissa, Amonida
Frankish, Adam
Hunt, Sarah E
Kostadima, Myrto
Langridge, Nicholas
Martin, Fergal J
Muffato, Matthieu
Perry, Emily
Ruffier, Magali
Staines, Dan M
Trevanion, Stephen J
Aken, Bronwen L
Cunningham, Fiona
Yates, Andrew
Flicek, Paul
author_sort Zerbino, Daniel R
collection PubMed
description The Ensembl project has been aggregating, processing, integrating and redistributing genomic datasets since the initial releases of the draft human genome, with the aim of accelerating genomics research through rapid open distribution of public data. Large amounts of raw data are thus transformed into knowledge, which is made available via a multitude of channels, in particular our browser (http://www.ensembl.org). Over time, we have expanded in multiple directions. First, our resources describe multiple fields of genomics, in particular gene annotation, comparative genomics, genetics and epigenomics. Second, we cover a growing number of genome assemblies; Ensembl Release 90 contains exactly 100. Third, our databases feed simultaneously into an array of services designed around different use cases, ranging from quick browsing to genome-wide bioinformatic analysis. We present here the latest developments of the Ensembl project, with a focus on managing an increasing number of assemblies, supporting efforts in genome interpretation and improving our browser.
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spelling pubmed-57532062018-01-05 Ensembl 2018 Zerbino, Daniel R Achuthan, Premanand Akanni, Wasiu Amode, M Ridwan Barrell, Daniel Bhai, Jyothish Billis, Konstantinos Cummins, Carla Gall, Astrid Girón, Carlos García Gil, Laurent Gordon, Leo Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas To, Jimmy Kiang Laird, Matthew R Lavidas, Ilias Liu, Zhicheng Loveland, Jane E Maurel, Thomas McLaren, William Moore, Benjamin Mudge, Jonathan Murphy, Daniel N Newman, Victoria Nuhn, Michael Ogeh, Denye Ong, Chuang Kee Parker, Anne Patricio, Mateus Riat, Harpreet Singh Schuilenburg, Helen Sheppard, Dan Sparrow, Helen Taylor, Kieron Thormann, Anja Vullo, Alessandro Walts, Brandon Zadissa, Amonida Frankish, Adam Hunt, Sarah E Kostadima, Myrto Langridge, Nicholas Martin, Fergal J Muffato, Matthieu Perry, Emily Ruffier, Magali Staines, Dan M Trevanion, Stephen J Aken, Bronwen L Cunningham, Fiona Yates, Andrew Flicek, Paul Nucleic Acids Res Database Issue The Ensembl project has been aggregating, processing, integrating and redistributing genomic datasets since the initial releases of the draft human genome, with the aim of accelerating genomics research through rapid open distribution of public data. Large amounts of raw data are thus transformed into knowledge, which is made available via a multitude of channels, in particular our browser (http://www.ensembl.org). Over time, we have expanded in multiple directions. First, our resources describe multiple fields of genomics, in particular gene annotation, comparative genomics, genetics and epigenomics. Second, we cover a growing number of genome assemblies; Ensembl Release 90 contains exactly 100. Third, our databases feed simultaneously into an array of services designed around different use cases, ranging from quick browsing to genome-wide bioinformatic analysis. We present here the latest developments of the Ensembl project, with a focus on managing an increasing number of assemblies, supporting efforts in genome interpretation and improving our browser. Oxford University Press 2018-01-04 2017-11-16 /pmc/articles/PMC5753206/ /pubmed/29155950 http://dx.doi.org/10.1093/nar/gkx1098 Text en © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Zerbino, Daniel R
Achuthan, Premanand
Akanni, Wasiu
Amode, M Ridwan
Barrell, Daniel
Bhai, Jyothish
Billis, Konstantinos
Cummins, Carla
Gall, Astrid
Girón, Carlos García
Gil, Laurent
Gordon, Leo
Haggerty, Leanne
Haskell, Erin
Hourlier, Thibaut
Izuogu, Osagie G
Janacek, Sophie H
Juettemann, Thomas
To, Jimmy Kiang
Laird, Matthew R
Lavidas, Ilias
Liu, Zhicheng
Loveland, Jane E
Maurel, Thomas
McLaren, William
Moore, Benjamin
Mudge, Jonathan
Murphy, Daniel N
Newman, Victoria
Nuhn, Michael
Ogeh, Denye
Ong, Chuang Kee
Parker, Anne
Patricio, Mateus
Riat, Harpreet Singh
Schuilenburg, Helen
Sheppard, Dan
Sparrow, Helen
Taylor, Kieron
Thormann, Anja
Vullo, Alessandro
Walts, Brandon
Zadissa, Amonida
Frankish, Adam
Hunt, Sarah E
Kostadima, Myrto
Langridge, Nicholas
Martin, Fergal J
Muffato, Matthieu
Perry, Emily
Ruffier, Magali
Staines, Dan M
Trevanion, Stephen J
Aken, Bronwen L
Cunningham, Fiona
Yates, Andrew
Flicek, Paul
Ensembl 2018
title Ensembl 2018
title_full Ensembl 2018
title_fullStr Ensembl 2018
title_full_unstemmed Ensembl 2018
title_short Ensembl 2018
title_sort ensembl 2018
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753206/
https://www.ncbi.nlm.nih.gov/pubmed/29155950
http://dx.doi.org/10.1093/nar/gkx1098
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