Cargando…

PancanQTL: systematic identification of cis-eQTLs and trans-eQTLs in 33 cancer types

Expression quantitative trait locus (eQTL) analysis, which links variations in gene expression to genotypes, is essential to understanding gene regulation and to interpreting disease-associated loci. Currently identified eQTLs are mainly in samples of blood and other normal tissues. However, no data...

Descripción completa

Detalles Bibliográficos
Autores principales:	Gong, Jing, Mei, Shufang, Liu, Chunjie, Xiang, Yu, Ye, Youqiong, Zhang, Zhao, Feng, Jing, Liu, Renyan, Diao, Lixia, Guo, An-Yuan, Miao, Xiaoping, Han, Leng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2018
Materias:	Database Issue
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753226/ https://www.ncbi.nlm.nih.gov/pubmed/29036324 http://dx.doi.org/10.1093/nar/gkx861

Ejemplares similares

Integrative Modeling of eQTLs and Cis-Regulatory Elements Suggests Mechanisms Underlying Cell Type Specificity of eQTLs
por: Brown, Christopher D., et al.
Publicado: (2013)

Correction: Integrative Modeling of eQTLs and Cis-Regulatory Elements Suggests Mechanisms Underlying Cell Type Specificity of eQTLs
Publicado: (2014)

Linking Metabolic QTLs with Network and cis-eQTLs Controlling Biosynthetic Pathways
por: Wentzell, Adam M, et al.
Publicado: (2007)

seeQTL: a searchable database for human eQTLs
por: Xia, Kai, et al.
Publicado: (2012)

Sequence Polymorphisms Cause Many False cis eQTLs
por: Alberts, Rudi, et al.
Publicado: (2007)

Leveraging supervised learning for functionally informed fine-mapping of cis-eQTLs identifies an additional 20,913 putative causal eQTLs
por: Wang, Qingbo S., et al.
Publicado: (2021)

Inference of modules associated to eQTLs
por: Kreimer, Anat, et al.
Publicado: (2012)

Bipartite Community Structure of eQTLs
por: Platig, John, et al.
Publicado: (2016)

Mapping QTLs for oil traits and eQTLs for oleosin genes in jatropha
por: Liu, Peng, et al.
Publicado: (2011)

Identification of eQTLs and sQTLs associated with meat quality in beef
por: Leal-Gutiérrez, Joel D., et al.
Publicado: (2020)

Single-cell RNA sequencing identifies cell type-specific cis-eQTLs and co-expression QTLs
por: van der Wijst, Monique G.P., et al.
Publicado: (2018)

QTLs and eQTLs mapping related to citrandarins’ resistance to citrus gummosis disease
por: Lima, Rômulo P. M., et al.
Publicado: (2018)

Pancan-meQTL: a database to systematically evaluate the effects of genetic variants on methylation in human cancer
por: Gong, Jing, et al.
Publicado: (2019)

Discovery of novel hepatocyte eQTLs in African Americans
por: Zhong, Yizhen, et al.
Publicado: (2020)

eQTL Catalogue 2023: New datasets, X chromosome QTLs, and improved detection and visualisation of transcript-level QTLs
por: Kerimov, Nurlan, et al.
Publicado: (2023)

Joint analyses of multi-tissue Hi-C and eQTL data demonstrate close spatial proximity between eQTLs and their target genes
por: Yu, Jingting, et al.
Publicado: (2019)

Coanalysis of GWAS with eQTLs reveals disease-tissue associations
por: Kang, Hyunseok Peter, et al.
Publicado: (2012)

Lung eQTLs to Help Reveal the Molecular Underpinnings of Asthma
por: Hao, Ke, et al.
Publicado: (2012)

Limited evidence for blood eQTLs in human sexual dimorphism
por: Porcu, Eleonora, et al.
Publicado: (2022)

Synthesis of 53 tissue and cell line expression QTL datasets reveals master eQTLs
por: Zhang, Xiaoling, et al.
Publicado: (2014)

Genetic variations (eQTLs) in muscle transcriptome and mitochondrial genes, and trans-eQTL molecular pathways in feed efficiency from Danish breeding pigs
por: Carmelo, Victor A. O., et al.
Publicado: (2020)

Genome-wide eQTLs and heritability for gene expression traits in unrelated individuals
por: Yang, Shengjie, et al.
Publicado: (2014)

Transcription factor and chromatin features predict genes associated with eQTLs
por: Wang, Dennis, et al.
Publicado: (2013)

Correction: Lung eQTLs to Help Reveal the Molecular Underpinnings of Asthma
por: Hao, Ke, et al.
Publicado: (2012)

Identification of trans-eQTLs using mediation analysis with multiple mediators
por: Shan, Nayang, et al.
Publicado: (2019)

Identification of miRNA-eQTLs in maize mature leaf by GWAS
por: Chen, Shu-Yun, et al.
Publicado: (2020)

Cytokines mapping for tissue-specific expression, eQTLs and GWAS traits
por: Salnikova, Lyubov E., et al.
Publicado: (2020)

Tejaas: reverse regression increases power for detecting trans-eQTLs
por: Banerjee, Saikat, et al.
Publicado: (2021)

eQTLs as causal instruments for the reconstruction of hormone linked gene networks
por: Bankier, Sean, et al.
Publicado: (2022)

Lead Modulates trans- and cis-Expression Quantitative Trait Loci (eQTLs) in Drosophila melanogaster Heads
por: Qu, Wen, et al.
Publicado: (2018)

MirSNP, a database of polymorphisms altering miRNA target sites, identifies miRNA-related SNPs in GWAS SNPs and eQTLs
por: Liu, Chenxing, et al.
Publicado: (2012)

Robust Linear Models for Cis-eQTL Analysis
por: Rantalainen, Mattias, et al.
Publicado: (2015)

Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
por: Yang, Fan, et al.
Publicado: (2017)

Leveraging input and output structures for joint mapping of epistatic and marginal eQTLs
por: Lee, Seunghak, et al.
Publicado: (2012)

Cross-Population Joint Analysis of eQTLs: Fine Mapping and Functional Annotation
por: Wen, Xiaoquan, et al.
Publicado: (2015)

A block mixture model to map eQTLs for gene clustering and networking
por: Wang, Ningtao, et al.
Publicado: (2016)

PHACTR1 splicing isoforms and eQTLs in atherosclerosis-relevant human cells
por: Codina-Fauteux, Valérie-Anne, et al.
Publicado: (2018)

eQTLs are key players in the integration of genomic and transcriptomic data for phenotype prediction
por: Wade, Abdou Rahmane, et al.
Publicado: (2022)

Meta-eQTL: a tool set for flexible eQTL meta-analysis
por: Di Narzo, Antonio Fabio, et al.
Publicado: (2014)

Genome-Wide Identification of Expression Quantitative Trait Loci (eQTLs) in Human Heart
por: Koopmann, Tamara T., et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_h1jt77ekup264ddc3h5n0rhm1i