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Saccharomyces genome database informs human biology

The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org) is an expertly curated database of literature-derived functional information for the model organism budding yeast, Saccharomyces cerevisiae. SGD constantly strives to synergize new types of experimental data and bioinformatics predi...

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Autores principales: Skrzypek, Marek S, Nash, Robert S, Wong, Edith D, MacPherson, Kevin A, Hellerstedt, Sage T, Engel, Stacia R, Karra, Kalpana, Weng, Shuai, Sheppard, Travis K, Binkley, Gail, Simison, Matt, Miyasato, Stuart R, Cherry, J Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753351/
https://www.ncbi.nlm.nih.gov/pubmed/29140510
http://dx.doi.org/10.1093/nar/gkx1112
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author Skrzypek, Marek S
Nash, Robert S
Wong, Edith D
MacPherson, Kevin A
Hellerstedt, Sage T
Engel, Stacia R
Karra, Kalpana
Weng, Shuai
Sheppard, Travis K
Binkley, Gail
Simison, Matt
Miyasato, Stuart R
Cherry, J Michael
author_facet Skrzypek, Marek S
Nash, Robert S
Wong, Edith D
MacPherson, Kevin A
Hellerstedt, Sage T
Engel, Stacia R
Karra, Kalpana
Weng, Shuai
Sheppard, Travis K
Binkley, Gail
Simison, Matt
Miyasato, Stuart R
Cherry, J Michael
author_sort Skrzypek, Marek S
collection PubMed
description The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org) is an expertly curated database of literature-derived functional information for the model organism budding yeast, Saccharomyces cerevisiae. SGD constantly strives to synergize new types of experimental data and bioinformatics predictions with existing data, and to organize them into a comprehensive and up-to-date information resource. The primary mission of SGD is to facilitate research into the biology of yeast and to provide this wealth of information to advance, in many ways, research on other organisms, even those as evolutionarily distant as humans. To build such a bridge between biological kingdoms, SGD is curating data regarding yeast-human complementation, in which a human gene can successfully replace the function of a yeast gene, and/or vice versa. These data are manually curated from published literature, made available for download, and incorporated into a variety of analysis tools provided by SGD.
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spelling pubmed-57533512018-01-05 Saccharomyces genome database informs human biology Skrzypek, Marek S Nash, Robert S Wong, Edith D MacPherson, Kevin A Hellerstedt, Sage T Engel, Stacia R Karra, Kalpana Weng, Shuai Sheppard, Travis K Binkley, Gail Simison, Matt Miyasato, Stuart R Cherry, J Michael Nucleic Acids Res Database Issue The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org) is an expertly curated database of literature-derived functional information for the model organism budding yeast, Saccharomyces cerevisiae. SGD constantly strives to synergize new types of experimental data and bioinformatics predictions with existing data, and to organize them into a comprehensive and up-to-date information resource. The primary mission of SGD is to facilitate research into the biology of yeast and to provide this wealth of information to advance, in many ways, research on other organisms, even those as evolutionarily distant as humans. To build such a bridge between biological kingdoms, SGD is curating data regarding yeast-human complementation, in which a human gene can successfully replace the function of a yeast gene, and/or vice versa. These data are manually curated from published literature, made available for download, and incorporated into a variety of analysis tools provided by SGD. Oxford University Press 2018-01-04 2017-11-11 /pmc/articles/PMC5753351/ /pubmed/29140510 http://dx.doi.org/10.1093/nar/gkx1112 Text en © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Issue
Skrzypek, Marek S
Nash, Robert S
Wong, Edith D
MacPherson, Kevin A
Hellerstedt, Sage T
Engel, Stacia R
Karra, Kalpana
Weng, Shuai
Sheppard, Travis K
Binkley, Gail
Simison, Matt
Miyasato, Stuart R
Cherry, J Michael
Saccharomyces genome database informs human biology
title Saccharomyces genome database informs human biology
title_full Saccharomyces genome database informs human biology
title_fullStr Saccharomyces genome database informs human biology
title_full_unstemmed Saccharomyces genome database informs human biology
title_short Saccharomyces genome database informs human biology
title_sort saccharomyces genome database informs human biology
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753351/
https://www.ncbi.nlm.nih.gov/pubmed/29140510
http://dx.doi.org/10.1093/nar/gkx1112
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