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WormBase 2017: molting into a new stage

WormBase (http://www.wormbase.org) is an important knowledge resource for biomedical researchers worldwide. To accommodate the ever increasing amount and complexity of research data, WormBase continues to advance its practices on data acquisition, curation and retrieval to most effectively deliver c...

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Autores principales: Lee, Raymond Y N, Howe, Kevin L, Harris, Todd W, Arnaboldi, Valerio, Cain, Scott, Chan, Juancarlos, Chen, Wen J, Davis, Paul, Gao, Sibyl, Grove, Christian, Kishore, Ranjana, Muller, Hans-Michael, Nakamura, Cecilia, Nuin, Paulo, Paulini, Michael, Raciti, Daniela, Rodgers, Faye, Russell, Matt, Schindelman, Gary, Tuli, Mary Ann, Van Auken, Kimberly, Wang, Qinghua, Williams, Gary, Wright, Adam, Yook, Karen, Berriman, Matthew, Kersey, Paul, Schedl, Tim, Stein, Lincoln, Sternberg, Paul W
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753391/
https://www.ncbi.nlm.nih.gov/pubmed/29069413
http://dx.doi.org/10.1093/nar/gkx998
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author Lee, Raymond Y N
Howe, Kevin L
Harris, Todd W
Arnaboldi, Valerio
Cain, Scott
Chan, Juancarlos
Chen, Wen J
Davis, Paul
Gao, Sibyl
Grove, Christian
Kishore, Ranjana
Muller, Hans-Michael
Nakamura, Cecilia
Nuin, Paulo
Paulini, Michael
Raciti, Daniela
Rodgers, Faye
Russell, Matt
Schindelman, Gary
Tuli, Mary Ann
Van Auken, Kimberly
Wang, Qinghua
Williams, Gary
Wright, Adam
Yook, Karen
Berriman, Matthew
Kersey, Paul
Schedl, Tim
Stein, Lincoln
Sternberg, Paul W
author_facet Lee, Raymond Y N
Howe, Kevin L
Harris, Todd W
Arnaboldi, Valerio
Cain, Scott
Chan, Juancarlos
Chen, Wen J
Davis, Paul
Gao, Sibyl
Grove, Christian
Kishore, Ranjana
Muller, Hans-Michael
Nakamura, Cecilia
Nuin, Paulo
Paulini, Michael
Raciti, Daniela
Rodgers, Faye
Russell, Matt
Schindelman, Gary
Tuli, Mary Ann
Van Auken, Kimberly
Wang, Qinghua
Williams, Gary
Wright, Adam
Yook, Karen
Berriman, Matthew
Kersey, Paul
Schedl, Tim
Stein, Lincoln
Sternberg, Paul W
author_sort Lee, Raymond Y N
collection PubMed
description WormBase (http://www.wormbase.org) is an important knowledge resource for biomedical researchers worldwide. To accommodate the ever increasing amount and complexity of research data, WormBase continues to advance its practices on data acquisition, curation and retrieval to most effectively deliver comprehensive knowledge about Caenorhabditis elegans, and genomic information about other nematodes and parasitic flatworms. Recent notable enhancements include user-directed submission of data, such as micropublication; genomic data curation and presentation, including additional genomes and JBrowse, respectively; new query tools, such as SimpleMine, Gene Enrichment Analysis; new data displays, such as the Person Lineage browser and the Summary of Ontology-based Annotations. Anticipating more rapid data growth ahead, WormBase continues the process of migrating to a cutting-edge database technology to achieve better stability, scalability, reproducibility and a faster response time. To better serve the broader research community, WormBase, with five other Model Organism Databases and The Gene Ontology project, have begun to collaborate formally as the Alliance of Genome Resources.
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spelling pubmed-57533912018-01-05 WormBase 2017: molting into a new stage Lee, Raymond Y N Howe, Kevin L Harris, Todd W Arnaboldi, Valerio Cain, Scott Chan, Juancarlos Chen, Wen J Davis, Paul Gao, Sibyl Grove, Christian Kishore, Ranjana Muller, Hans-Michael Nakamura, Cecilia Nuin, Paulo Paulini, Michael Raciti, Daniela Rodgers, Faye Russell, Matt Schindelman, Gary Tuli, Mary Ann Van Auken, Kimberly Wang, Qinghua Williams, Gary Wright, Adam Yook, Karen Berriman, Matthew Kersey, Paul Schedl, Tim Stein, Lincoln Sternberg, Paul W Nucleic Acids Res Database Issue WormBase (http://www.wormbase.org) is an important knowledge resource for biomedical researchers worldwide. To accommodate the ever increasing amount and complexity of research data, WormBase continues to advance its practices on data acquisition, curation and retrieval to most effectively deliver comprehensive knowledge about Caenorhabditis elegans, and genomic information about other nematodes and parasitic flatworms. Recent notable enhancements include user-directed submission of data, such as micropublication; genomic data curation and presentation, including additional genomes and JBrowse, respectively; new query tools, such as SimpleMine, Gene Enrichment Analysis; new data displays, such as the Person Lineage browser and the Summary of Ontology-based Annotations. Anticipating more rapid data growth ahead, WormBase continues the process of migrating to a cutting-edge database technology to achieve better stability, scalability, reproducibility and a faster response time. To better serve the broader research community, WormBase, with five other Model Organism Databases and The Gene Ontology project, have begun to collaborate formally as the Alliance of Genome Resources. Oxford University Press 2018-01-04 2017-10-24 /pmc/articles/PMC5753391/ /pubmed/29069413 http://dx.doi.org/10.1093/nar/gkx998 Text en © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Lee, Raymond Y N
Howe, Kevin L
Harris, Todd W
Arnaboldi, Valerio
Cain, Scott
Chan, Juancarlos
Chen, Wen J
Davis, Paul
Gao, Sibyl
Grove, Christian
Kishore, Ranjana
Muller, Hans-Michael
Nakamura, Cecilia
Nuin, Paulo
Paulini, Michael
Raciti, Daniela
Rodgers, Faye
Russell, Matt
Schindelman, Gary
Tuli, Mary Ann
Van Auken, Kimberly
Wang, Qinghua
Williams, Gary
Wright, Adam
Yook, Karen
Berriman, Matthew
Kersey, Paul
Schedl, Tim
Stein, Lincoln
Sternberg, Paul W
WormBase 2017: molting into a new stage
title WormBase 2017: molting into a new stage
title_full WormBase 2017: molting into a new stage
title_fullStr WormBase 2017: molting into a new stage
title_full_unstemmed WormBase 2017: molting into a new stage
title_short WormBase 2017: molting into a new stage
title_sort wormbase 2017: molting into a new stage
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753391/
https://www.ncbi.nlm.nih.gov/pubmed/29069413
http://dx.doi.org/10.1093/nar/gkx998
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