Cargando…

High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping

Escherichia spp., including E. albertii and E. coli, Shigella dysenteriae, and S. flexneri are causative agents of foodborne disease. We report here reference-level whole-genome sequences of E. albertii (2014C-4356), E. coli (2011C-4315 and 2012C-4431), S. dysenteriae (BU53M1), and S. flexneri (94-3...

Descripción completa

Detalles Bibliográficos
Autores principales:	Schroeder, Max R., Juieng, Phalasy, Batra, Dhwani, Knipe, Kristen, Rowe, Lori A., Sheth, Mili, Smith, Peyton, Garcia-Toledo, Lisley, Loparev, Vladimir N., Lindsey, Rebecca L.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2018
Materias:	Prokaryotes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5754485/ https://www.ncbi.nlm.nih.gov/pubmed/29301876 http://dx.doi.org/10.1128/genomeA.01384-17

Ejemplares similares

High-Quality Whole-Genome Sequences for 59 Historical Shigella Strains Generated with PacBio Sequencing
por: Kim, Justin, et al.
Publicado: (2018)

High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States
por: Lindsey, Rebecca L., et al.
Publicado: (2017)

High-Quality Draft Genome Sequences for Five Non-O157 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing and Optical Maps
por: Lindsey, Rebecca L., et al.
Publicado: (2016)

High-Quality Draft Genome Sequences for Four Drug-Resistant or Outbreak-Associated Shigella sonnei Strains Generated with PacBio Sequencing and Whole-Genome Maps
por: Lindsey, Rebecca L., et al.
Publicado: (2017)

PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli, and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene
por: Lindsey, Rebecca L., et al.
Publicado: (2018)

First Draft Genome Sequence of Leishmania (Viannia) lainsoni Strain 216-34, Isolated from a Peruvian Clinical Case
por: Lin, Wuling, et al.
Publicado: (2019)

Correction for Weigand et al., Complete Genome Sequences of Two Bordetella hinzii Strains Isolated from Humans
por: Weigand, Michael R., et al.
Publicado: (2016)

High-Quality Whole-Genome Sequences for 77 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing
por: Patel, Pooja N., et al.
Publicado: (2018)

Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli Strains from Serotypes O119:H4 and O165:H25
por: Lindsey, Rebecca L., et al.
Publicado: (2015)

Genome Sequence of the Amphotericin B-Resistant Candida duobushaemulonii Strain B09383
por: Chow, Nancy A., et al.
Publicado: (2018)

Complete Genome Sequences of Four Strains from the 2015-2016 Elizabethkingia anophelis Outbreak
por: Nicholson, Ainsley C., et al.
Publicado: (2016)

High-Quality Whole-Genome Sequences for 21 Enterotoxigenic Escherichia coli Strains Generated with PacBio Sequencing
por: Smith, Peyton, et al.
Publicado: (2018)

Genome Sequence of a Multidrug-Resistant Candida haemulonii Isolate from a Patient with Chronic Leg Ulcers in Israel
por: Chow, Nancy A., et al.
Publicado: (2018)

Complete Genome Sequences of Bordetella pertussis Vaccine Reference Strains 134 and 10536
por: Weigand, Michael R., et al.
Publicado: (2016)

Complete Genome Sequences of Four Different Bordetella sp. Isolates Causing Human Respiratory Infections
por: Weigand, Michael R., et al.
Publicado: (2016)

A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers
por: Quail, Michael A, et al.
Publicado: (2012)

Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens
por: Weigand, Michael R., et al.
Publicado: (2019)

Draft Genome Sequence of French Guiana Leishmania (Viannia) guyanensis Strain 204-365, Assembled Using Long Reads
por: Batra, Dhwani, et al.
Publicado: (2018)

Complete Circularized Genome Sequences of Four Strains of Elizabethkingia anophelis, Including Two Novel Strains Isolated from Wild-Caught Anopheles sinensis
por: Pei, Dong, et al.
Publicado: (2017)

Draft Genome Sequences of Leishmania (Leishmania) amazonensis, Leishmania (Leishmania) mexicana, and Leishmania (Leishmania) aethiopica, Potential Etiological Agents of Diffuse Cutaneous Leishmaniasis
por: Batra, Dhwani, et al.
Publicado: (2019)

Twelve Complete Reference Genomes of Clinical Isolates in the Capnocytophaga Genus
por: Villarma, Aaron, et al.
Publicado: (2017)

Raw pacific biosciences and illumina sequencing reads and assembled genome data for the cattle ticks Rhipicephalus microplus and Rhipicephalus annulatus
por: Guerrero, Felix D., et al.
Publicado: (2021)

First Full Draft Genome Sequence of Plasmodium brasilianum
por: Talundzic, Eldin, et al.
Publicado: (2017)

Identification of nonserotypeable Shigella spp. using genome sequencing: a step forward
por: Dhiviya Prabaa, Muthuirulandi Sethuvel, et al.
Publicado: (2017)

Draft Chromosome Sequences of a Clinical Isolate of the Free-Living Ameba Naegleria fowleri
por: Ali, Ibne Karim M., et al.
Publicado: (2021)

Three Genome Sequences of Legionella pneumophila subsp. pascullei Associated with Colonization of a Health Care Facility
por: Kozak-Muiznieks, Natalia A., et al.
Publicado: (2016)

Microbial phylogenetic profiling with the Pacific Biosciences sequencing platform
por: Fichot, Erin B, et al.
Publicado: (2013)

The Prevalence of CTX-M-15 Extended-spectrum β-Lactamases Among Salmonella spp. and Shigella spp. Isolated from three Iranian Hospitals
por: Bialvaei, Abed Zahedi, et al.
Publicado: (2017)

Azithromycin Resistance in Shigella spp. in Southeast Asia
por: Darton, Thomas C., et al.
Publicado: (2018)

Complete Genome Sequence of Nocardia farcinica W6977(T) Obtained by Combining Illumina and PacBio Reads
por: Gulvik, Christopher A., et al.
Publicado: (2019)

Genome Sequences of Oblitimonas alkaliphila gen. nov. sp. nov. (Proposed), a Novel Bacterium of the Pseudomonadaceae Family
por: Lauer, Ana C., et al.
Publicado: (2015)

Chinese bioscience: The sequence factory
por: Cyranoski, David
Publicado: (2010)

Rapid Molecular Approach for Simultaneous Detection of Salmonella spp., Shigella spp., and Vibrio cholera
por: Ranjbar, Reza, et al.
Publicado: (2016)

Draft Genome Sequences of Trichophyton rubrum CMCC(F)T(1i) and Trichophyton violaceum CMCC(F)T(3l) by Illumina 2000 and Pacific Biosciences
por: Zhan, Ping, et al.
Publicado: (2017)

Complete Genome Sequence of a Novel Myoviridae Phage, SfΦ01, Infecting Shigella spp.
por: Kitajima, Masaaki, et al.
Publicado: (2019)

Shigella spp. surveillance in Indonesia: the emergence or reemergence of S. dysenteriae.
por: Subekti, D, et al.
Publicado: (2001)

High Rates of Genome Rearrangements and Pathogenicity of Shigella spp.
por: Seferbekova, Zaira, et al.
Publicado: (2021)

Pacific biosciences sequencing technology for genotyping and variation discovery in human data
por: Carneiro, Mauricio O, et al.
Publicado: (2012)

Chromosome-Level Genome Sequence of Leishmania (Leishmania) tropica Strain CDC216-162, Isolated from an Afghanistan Clinical Case
por: Unoarumhi, Yvette, et al.
Publicado: (2021)

Complete Genome Sequences of Bordetella pertussis Isolates with Novel Pertactin-Deficient Deletions
por: Weigand, Michael R., et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_7hb4q0qtvv8rjs002rjkodmfb5