Cargando…

Genomic abundance and transcriptional activity of diverse gypsy and copia long terminal repeat retrotransposons in three wild sunflower species

BACKGROUND: Long terminal repeat (LTR) retrotransposons are highly abundant in plant genomes and require transcriptional activity for their proliferative mode of replication. These sequences exist in plant genomes as diverse sublineages within the main element superfamilies (i.e., gypsy and copia)....

Descripción completa

Detalles Bibliográficos
Autores principales:	Qiu, Fan, Ungerer, Mark C.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2018
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5755311/ https://www.ncbi.nlm.nih.gov/pubmed/29304730 http://dx.doi.org/10.1186/s12870-017-1223-z

Ejemplares similares

Copia and Gypsy retrotransposons activity in sunflower (Helianthus annuus L.)
por: Vukich, Marco, et al.
Publicado: (2009)

The Landscape of Copia and Gypsy Retrotransposon During Maize Domestication and Improvement
por: Zhang, Xiangbo, et al.
Publicado: (2019)

Proliferation of Ty3/gypsy-like retrotransposons in hybrid sunflower taxa inferred from phylogenetic data
por: Ungerer, Mark C, et al.
Publicado: (2009)

Long Terminal Repeat Retrotransposon Content in Eight Diploid Sunflower Species Inferred from Next-Generation Sequence Data
por: Tetreault, Hannah M., et al.
Publicado: (2016)

Identification of potential transcriptionally active Copia LTR retrotransposons in Eucalyptus
por: Marcon, Helena, et al.
Publicado: (2011)

Transcriptional Dynamics of LTR Retrotransposons in Early Generation and Ancient Sunflower Hybrids
por: Ungerer, Mark C., et al.
Publicado: (2013)

Filamentous ascomycete genomes provide insights into Copia retrotransposon diversity in fungi
por: Donnart, Tifenn, et al.
Publicado: (2017)

Characterization, Genomic Organization, Abundance, and Chromosomal Distribution of Ty1-copia Retrotransposons in Erianthus arundinaceus
por: Huang, Yongji, et al.
Publicado: (2017)

Relatedness of baculovirus and gypsy retrotransposon envelope proteins
por: Rohrmann, George F, et al.
Publicado: (2001)

Sequence heterogeneity and phylogenetic relationships between the copia retrotransposon in Drosophila species of the repleta and melanogaster groups
por: De Almeida, Luciane M, et al.
Publicado: (2006)

Massive Expansion of Gypsy-Like Retrotransposons in Microbotryum Fungi
por: Horns, Felix, et al.
Publicado: (2017)

Genome Size Evolution Mediated by Gypsy Retrotransposons in Brassicaceae
por: Zhang, Shi-Jian, et al.
Publicado: (2020)

Characterization of ten novel Ty1/copia-like retrotransposon families of the grapevine genome
por: Moisy, Cédric, et al.
Publicado: (2008)

Mutations in retrotransposon AtCOPIA4 compromises resistance to Hyaloperonospora parasitica in Arabidopsis thaliana
por: Wang, Yi-Hong, et al.
Publicado: (2010)

Structure of the Ty3/Gypsy retrotransposon capsid and the evolution of retroviruses
por: Dodonova, Svetlana O., et al.
Publicado: (2019)

Transposable Element Proliferation and Genome Expansion Are Rare in Contemporary Sunflower Hybrid Populations Despite Widespread Transcriptional Activity of LTR Retrotransposons
por: Kawakami, Takeshi, et al.
Publicado: (2011)

Ty1-copia group retrotransposons and the evolution of retroelements in several angiosperm plants: evidence of horizontal transmission
por: Woodrow, Pasqualina, et al.
Publicado: (2012)

LTR-Retrotransposons in R. exoculata and Other Crustaceans: The Outstanding Success of GalEa-Like Copia Elements
por: Piednoël, Mathieu, et al.
Publicado: (2013)

TARE1, a Mutated Copia-Like LTR Retrotransposon Followed by Recent Massive Amplification in Tomato
por: Yin, Hao, et al.
Publicado: (2013)

Specific LTR-Retrotransposons Show Copy Number Variations between Wild and Cultivated Sunflowers
por: Mascagni, Flavia, et al.
Publicado: (2018)

Evolutionary Dynamics of the Ty3/Gypsy LTR Retrotransposons in the Genome of Anopheles gambiae
por: Tubio, Jose Manuel C., et al.
Publicado: (2011)

Corky, a gypsy-like retrotransposon is differentially transcribed in Quercus suber tissues
por: Rocheta, Margarida, et al.
Publicado: (2012)

New Insights into Long Terminal Repeat Retrotransposons in Mulberry Species
por: Ma, Bi, et al.
Publicado: (2019)

Long terminal repeat retrotransposons of Mus musculus
por: McCarthy, Eugene M, et al.
Publicado: (2004)

Long terminal repeat retrotransposons of Oryza sativa
por: McCarthy, Eugene M, et al.
Publicado: (2002)

Terminal-Repeat Retrotransposons in Miniature (TRIMs) in bivalves
por: Šatović, Eva, et al.
Publicado: (2019)

The Wukong Terminal-Repeat Retrotransposon in Miniature (TRIM) Elements in Diverse Maize Germplasm
por: Liu, Zhen, et al.
Publicado: (2015)

Reverse Transcription in the Saccharomyces cerevisiae Long-Terminal Repeat Retrotransposon Ty3
por: Rausch, Jason W., et al.
Publicado: (2017)

EARE-1, a Transcriptionally Active Ty1/Copia-Like Retrotransposon Has Colonized the Genome of Excoecaria agallocha through Horizontal Transfer
por: Huang, Jianhua, et al.
Publicado: (2017)

Weak Effect of Gypsy Retrotransposon Bursts on Sonneratia alba Salt Stress Gene Expression
por: Wang, Yushuai, et al.
Publicado: (2022)

Diversity, dynamics and effects of long terminal repeat retrotransposons in the model grass Brachypodium distachyon
por: Stritt, Christoph, et al.
Publicado: (2019)

Structural characterization of copia-type retrotransposons leads to insights into the marker development in a biofuel crop, Jatropha curcas L.
por: Alipour, Atefeh, et al.
Publicado: (2013)

SIRE-1, A putative plant retrovirus is closely related to a legume TY1-copia retrotransposon family
por: Pearce, Stephen R.
Publicado: (2006)

A transcriptionally active copia-like retroelement in Citrus limon
por: De Felice, Bruna, et al.
Publicado: (2008)

Specific suppression of long terminal repeat retrotransposon mobilization in plants
por: Brestovitsky, Anna, et al.
Publicado: (2022)

The impact of Ty3-gypsy group LTR retrotransposons Fatima on B-genome specificity of polyploid wheats
por: Salina, Elena A, et al.
Publicado: (2011)

Copias en color : la técnica fotográfica del positivo en color
por: Coote, Jack Howard Roy
Publicado: (1976)

Landscape and evolutionary dynamics of terminal repeat retrotransposons in miniature in plant genomes
por: Gao, Dongying, et al.
Publicado: (2016)

Variation in Copy Number of Ty3/Gypsy Centromeric Retrotransposons in the Genomes of Thinopyrum intermedium and Its Diploid Progenitors
por: Divashuk, Mikhail G., et al.
Publicado: (2016)

Analysis of retrotransposon abundance, diversity and distribution in holocentric Eleocharis (Cyperaceae) genomes
por: de Souza, Thaíssa B, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_i8c4bi6ckcp8n542imkte7jsag