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Kinetics of the Strain-Promoted Oxidation-Controlled Cycloalkyne-1,2-quinone Cycloaddition: Experimental and Theoretical Studies
[Image: see text] Stimulated by its success in both bioconjugation and surface modification, we studied the strain-promoted oxidation-controlled cycloalkyne–1,2-quinone cycloaddition (SPOCQ) in three ways. First, the second-order rate constants and activation parameters (ΔH(⧧)) were determined of va...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5759032/ https://www.ncbi.nlm.nih.gov/pubmed/29260879 http://dx.doi.org/10.1021/acs.joc.7b02614 |
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author | Escorihuela, Jorge Das, Anita Looijen, Wilhelmus J. E. van Delft, Floris L. Aquino, Adelia J. A. Lischka, Hans Zuilhof, Han |
author_facet | Escorihuela, Jorge Das, Anita Looijen, Wilhelmus J. E. van Delft, Floris L. Aquino, Adelia J. A. Lischka, Hans Zuilhof, Han |
author_sort | Escorihuela, Jorge |
collection | PubMed |
description | [Image: see text] Stimulated by its success in both bioconjugation and surface modification, we studied the strain-promoted oxidation-controlled cycloalkyne–1,2-quinone cycloaddition (SPOCQ) in three ways. First, the second-order rate constants and activation parameters (ΔH(⧧)) were determined of various cyclooctynes reacting with 4-tert-butyl-1,2-quinone in a SPOCQ reaction, yielding values for ΔH(⧧) of 4.5, 7.3, and 12.1 kcal/mol, for bicyclo[6.1.0]non-4-yne (BCN), cyclooctyne (OCT), and dibenzoazacyclooctyne (DIBAC), respectively. Second, their reaction paths were investigated in detail by a range of quantum mechanical calculations. Single-configuration theoretical methods, like various DFT and a range of MP2-based methods, typically overestimate this barrier by 3–8 kcal/mol (after inclusion of zero-point energy, thermal, and solvation corrections), whereas MP2 itself underestimates the barrier significantly. Only dispersion-corrected DFT methods like B97D (yielding 4.9, 6.4, and 12.1 kcal/mol for these three reactions) and high-level CCSD(T) and multireference multiconfiguration AQCC ab initio approaches (both yielding 8.2 kcal/mol for BCN) give good approximations of experimental data. Finally, the multireference methods show that the radical character in the TS is rather small, thus rationalizing the use of single-reference methods like B97D and SCS-MP2 as intrinsically valid approaches. |
format | Online Article Text |
id | pubmed-5759032 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-57590322018-01-10 Kinetics of the Strain-Promoted Oxidation-Controlled Cycloalkyne-1,2-quinone Cycloaddition: Experimental and Theoretical Studies Escorihuela, Jorge Das, Anita Looijen, Wilhelmus J. E. van Delft, Floris L. Aquino, Adelia J. A. Lischka, Hans Zuilhof, Han J Org Chem [Image: see text] Stimulated by its success in both bioconjugation and surface modification, we studied the strain-promoted oxidation-controlled cycloalkyne–1,2-quinone cycloaddition (SPOCQ) in three ways. First, the second-order rate constants and activation parameters (ΔH(⧧)) were determined of various cyclooctynes reacting with 4-tert-butyl-1,2-quinone in a SPOCQ reaction, yielding values for ΔH(⧧) of 4.5, 7.3, and 12.1 kcal/mol, for bicyclo[6.1.0]non-4-yne (BCN), cyclooctyne (OCT), and dibenzoazacyclooctyne (DIBAC), respectively. Second, their reaction paths were investigated in detail by a range of quantum mechanical calculations. Single-configuration theoretical methods, like various DFT and a range of MP2-based methods, typically overestimate this barrier by 3–8 kcal/mol (after inclusion of zero-point energy, thermal, and solvation corrections), whereas MP2 itself underestimates the barrier significantly. Only dispersion-corrected DFT methods like B97D (yielding 4.9, 6.4, and 12.1 kcal/mol for these three reactions) and high-level CCSD(T) and multireference multiconfiguration AQCC ab initio approaches (both yielding 8.2 kcal/mol for BCN) give good approximations of experimental data. Finally, the multireference methods show that the radical character in the TS is rather small, thus rationalizing the use of single-reference methods like B97D and SCS-MP2 as intrinsically valid approaches. American Chemical Society 2017-12-20 2018-01-05 /pmc/articles/PMC5759032/ /pubmed/29260879 http://dx.doi.org/10.1021/acs.joc.7b02614 Text en Copyright © 2017 American Chemical Society This is an open access article published under a Creative Commons Non-Commercial No Derivative Works (CC-BY-NC-ND) Attribution License (http://pubs.acs.org/page/policy/authorchoice_ccbyncnd_termsofuse.html) , which permits copying and redistribution of the article, and creation of adaptations, all for non-commercial purposes. |
spellingShingle | Escorihuela, Jorge Das, Anita Looijen, Wilhelmus J. E. van Delft, Floris L. Aquino, Adelia J. A. Lischka, Hans Zuilhof, Han Kinetics of the Strain-Promoted Oxidation-Controlled Cycloalkyne-1,2-quinone Cycloaddition: Experimental and Theoretical Studies |
title | Kinetics of the Strain-Promoted
Oxidation-Controlled
Cycloalkyne-1,2-quinone Cycloaddition: Experimental and Theoretical
Studies |
title_full | Kinetics of the Strain-Promoted
Oxidation-Controlled
Cycloalkyne-1,2-quinone Cycloaddition: Experimental and Theoretical
Studies |
title_fullStr | Kinetics of the Strain-Promoted
Oxidation-Controlled
Cycloalkyne-1,2-quinone Cycloaddition: Experimental and Theoretical
Studies |
title_full_unstemmed | Kinetics of the Strain-Promoted
Oxidation-Controlled
Cycloalkyne-1,2-quinone Cycloaddition: Experimental and Theoretical
Studies |
title_short | Kinetics of the Strain-Promoted
Oxidation-Controlled
Cycloalkyne-1,2-quinone Cycloaddition: Experimental and Theoretical
Studies |
title_sort | kinetics of the strain-promoted
oxidation-controlled
cycloalkyne-1,2-quinone cycloaddition: experimental and theoretical
studies |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5759032/ https://www.ncbi.nlm.nih.gov/pubmed/29260879 http://dx.doi.org/10.1021/acs.joc.7b02614 |
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