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Microarray profiling of miRNA and mRNA expression in Rag2 knockout and wild-type mouse spleens

The Rag2 knockout (KO) mouse is one of the most popular immune compromised animal models used in biomedical research. The immune compromised state concurrently alters many signalling pathways and molecules, including miRNAs and mRNA transcripts that are involved in important biological processes. In...

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Autores principales: Reza, Abu Musa Md Talimur, Cho, Seong-Keun, Choi, Yun-Jung, Hong, Kwonho, Kim, Jin-Hoi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5759371/
https://www.ncbi.nlm.nih.gov/pubmed/29313843
http://dx.doi.org/10.1038/sdata.2017.199
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author Reza, Abu Musa Md Talimur
Cho, Seong-Keun
Choi, Yun-Jung
Hong, Kwonho
Kim, Jin-Hoi
author_facet Reza, Abu Musa Md Talimur
Cho, Seong-Keun
Choi, Yun-Jung
Hong, Kwonho
Kim, Jin-Hoi
author_sort Reza, Abu Musa Md Talimur
collection PubMed
description The Rag2 knockout (KO) mouse is one of the most popular immune compromised animal models used in biomedical research. The immune compromised state concurrently alters many signalling pathways and molecules, including miRNAs and mRNA transcripts that are involved in important biological processes. In addition, miRNAs and transcripts are interdependent, often forming a feedback loop; dysregulation in one might alter the expression of the other, and both participate in many physiological processes including immune regulation. Here, we describe a comprehensive dataset containing alterations in the expression of both miRNAs and mRNAs in Rag2 KO mice compared to their wild type counterparts. The miRNA and mRNA expression profiles were generated from total RNA using a miRNA expression microarray or a BeadChip microarray, respectively. Hence, this dataset will provide the groundwork for a comparative study of the miRNAs and mRNAs that are dysregulated in Rag2 KO mice. It is hoped that the data will illuminate how miRNAs mediate immune regulation, as well as the interaction between miRNAs and mRNAs in Rag2 KO mice.
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spelling pubmed-57593712018-01-22 Microarray profiling of miRNA and mRNA expression in Rag2 knockout and wild-type mouse spleens Reza, Abu Musa Md Talimur Cho, Seong-Keun Choi, Yun-Jung Hong, Kwonho Kim, Jin-Hoi Sci Data Data Descriptor The Rag2 knockout (KO) mouse is one of the most popular immune compromised animal models used in biomedical research. The immune compromised state concurrently alters many signalling pathways and molecules, including miRNAs and mRNA transcripts that are involved in important biological processes. In addition, miRNAs and transcripts are interdependent, often forming a feedback loop; dysregulation in one might alter the expression of the other, and both participate in many physiological processes including immune regulation. Here, we describe a comprehensive dataset containing alterations in the expression of both miRNAs and mRNAs in Rag2 KO mice compared to their wild type counterparts. The miRNA and mRNA expression profiles were generated from total RNA using a miRNA expression microarray or a BeadChip microarray, respectively. Hence, this dataset will provide the groundwork for a comparative study of the miRNAs and mRNAs that are dysregulated in Rag2 KO mice. It is hoped that the data will illuminate how miRNAs mediate immune regulation, as well as the interaction between miRNAs and mRNAs in Rag2 KO mice. Nature Publishing Group 2018-01-09 /pmc/articles/PMC5759371/ /pubmed/29313843 http://dx.doi.org/10.1038/sdata.2017.199 Text en Copyright © 2018, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files made available in this article.
spellingShingle Data Descriptor
Reza, Abu Musa Md Talimur
Cho, Seong-Keun
Choi, Yun-Jung
Hong, Kwonho
Kim, Jin-Hoi
Microarray profiling of miRNA and mRNA expression in Rag2 knockout and wild-type mouse spleens
title Microarray profiling of miRNA and mRNA expression in Rag2 knockout and wild-type mouse spleens
title_full Microarray profiling of miRNA and mRNA expression in Rag2 knockout and wild-type mouse spleens
title_fullStr Microarray profiling of miRNA and mRNA expression in Rag2 knockout and wild-type mouse spleens
title_full_unstemmed Microarray profiling of miRNA and mRNA expression in Rag2 knockout and wild-type mouse spleens
title_short Microarray profiling of miRNA and mRNA expression in Rag2 knockout and wild-type mouse spleens
title_sort microarray profiling of mirna and mrna expression in rag2 knockout and wild-type mouse spleens
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5759371/
https://www.ncbi.nlm.nih.gov/pubmed/29313843
http://dx.doi.org/10.1038/sdata.2017.199
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