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Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network

Segmentation of the levator hiatus in ultrasound allows the extraction of biometrics, which are of importance for pelvic floor disorder assessment. We present a fully automatic method using a convolutional neural network (CNN) to outline the levator hiatus in a two-dimensional image extracted from a...

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Autores principales: Bonmati, Ester, Hu, Yipeng, Sindhwani, Nikhil, Dietz, Hans Peter, D’hooge, Jan, Barratt, Dean, Deprest, Jan, Vercauteren, Tom
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5762003/
https://www.ncbi.nlm.nih.gov/pubmed/29340289
http://dx.doi.org/10.1117/1.JMI.5.2.021206
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author Bonmati, Ester
Hu, Yipeng
Sindhwani, Nikhil
Dietz, Hans Peter
D’hooge, Jan
Barratt, Dean
Deprest, Jan
Vercauteren, Tom
author_facet Bonmati, Ester
Hu, Yipeng
Sindhwani, Nikhil
Dietz, Hans Peter
D’hooge, Jan
Barratt, Dean
Deprest, Jan
Vercauteren, Tom
author_sort Bonmati, Ester
collection PubMed
description Segmentation of the levator hiatus in ultrasound allows the extraction of biometrics, which are of importance for pelvic floor disorder assessment. We present a fully automatic method using a convolutional neural network (CNN) to outline the levator hiatus in a two-dimensional image extracted from a three-dimensional ultrasound volume. In particular, our method uses a recently developed scaled exponential linear unit (SELU) as a nonlinear self-normalizing activation function, which for the first time has been applied in medical imaging with CNN. SELU has important advantages such as being parameter-free and mini-batch independent, which may help to overcome memory constraints during training. A dataset with 91 images from 35 patients during Valsalva, contraction, and rest, all labeled by three operators, is used for training and evaluation in a leave-one-patient-out cross validation. Results show a median Dice similarity coefficient of 0.90 with an interquartile range of 0.08, with equivalent performance to the three operators (with a Williams’ index of 1.03), and outperforming a U-Net architecture without the need for batch normalization. We conclude that the proposed fully automatic method achieved equivalent accuracy in segmenting the pelvic floor levator hiatus compared to a previous semiautomatic approach.
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spelling pubmed-57620032018-04-24 Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network Bonmati, Ester Hu, Yipeng Sindhwani, Nikhil Dietz, Hans Peter D’hooge, Jan Barratt, Dean Deprest, Jan Vercauteren, Tom J Med Imaging (Bellingham) Special Section on Image-Guided Procedures, Robotic Interventions, and Modeling Segmentation of the levator hiatus in ultrasound allows the extraction of biometrics, which are of importance for pelvic floor disorder assessment. We present a fully automatic method using a convolutional neural network (CNN) to outline the levator hiatus in a two-dimensional image extracted from a three-dimensional ultrasound volume. In particular, our method uses a recently developed scaled exponential linear unit (SELU) as a nonlinear self-normalizing activation function, which for the first time has been applied in medical imaging with CNN. SELU has important advantages such as being parameter-free and mini-batch independent, which may help to overcome memory constraints during training. A dataset with 91 images from 35 patients during Valsalva, contraction, and rest, all labeled by three operators, is used for training and evaluation in a leave-one-patient-out cross validation. Results show a median Dice similarity coefficient of 0.90 with an interquartile range of 0.08, with equivalent performance to the three operators (with a Williams’ index of 1.03), and outperforming a U-Net architecture without the need for batch normalization. We conclude that the proposed fully automatic method achieved equivalent accuracy in segmenting the pelvic floor levator hiatus compared to a previous semiautomatic approach. Society of Photo-Optical Instrumentation Engineers 2018-01-10 2018-04 /pmc/articles/PMC5762003/ /pubmed/29340289 http://dx.doi.org/10.1117/1.JMI.5.2.021206 Text en © The Authors. https://creativecommons.org/licenses/by/3.0/ Published by SPIE under a Creative Commons Attribution 3.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle Special Section on Image-Guided Procedures, Robotic Interventions, and Modeling
Bonmati, Ester
Hu, Yipeng
Sindhwani, Nikhil
Dietz, Hans Peter
D’hooge, Jan
Barratt, Dean
Deprest, Jan
Vercauteren, Tom
Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network
title Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network
title_full Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network
title_fullStr Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network
title_full_unstemmed Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network
title_short Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network
title_sort automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network
topic Special Section on Image-Guided Procedures, Robotic Interventions, and Modeling
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5762003/
https://www.ncbi.nlm.nih.gov/pubmed/29340289
http://dx.doi.org/10.1117/1.JMI.5.2.021206
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