Cargando…

The DNMT3B -579G>T Polymorphism Is Significantly Associated With the Risk of Gastric Cancer but not Lung Cancer in Chinese Population

The -149C>T and -579G>T, 2 single nucleotide polymorphisms in de novo methyltransferase 3B gene promoter, have been previously reported to potentially alter the promoter activity and to influence cancer risk. However, the results from previous studies remain conflicting rather than conclusive....

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Bifeng, Wang, Jingdong, Gu, Xiuli, Zhang, Jingli, Zhang, Jiankun, Feng, Xianhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5762089/
https://www.ncbi.nlm.nih.gov/pubmed/29332452
http://dx.doi.org/10.1177/1533034617740475
_version_ 1783291633274454016
author Chen, Bifeng
Wang, Jingdong
Gu, Xiuli
Zhang, Jingli
Zhang, Jiankun
Feng, Xianhong
author_facet Chen, Bifeng
Wang, Jingdong
Gu, Xiuli
Zhang, Jingli
Zhang, Jiankun
Feng, Xianhong
author_sort Chen, Bifeng
collection PubMed
description The -149C>T and -579G>T, 2 single nucleotide polymorphisms in de novo methyltransferase 3B gene promoter, have been previously reported to potentially alter the promoter activity and to influence cancer risk. However, the results from previous studies remain conflicting rather than conclusive. In view of this, we conducted a case–control study and then a meta-analysis to examine the association between these 2 single-nucleotide polymorphisms with risk of lung and gastric cancer in Chinese population. The genotyping was performed by polymerase chain reaction-restriction fragment length polymorphism and confirmed by sequencing. In this case–control study, no significant association with lung or gastric cancer risk was observed for -149C>T, while -579G>T was significantly correlated with the risk of gastric cancer but not lung cancer. Moreover, haplotype analysis showed that haplotype -149T/-579 T, which carried the risk -579 T allele, significantly increased the susceptibility to gastric cancer. However, none of the haplotypes was associated with the risk of lung cancer. The following meta-analysis involved only Chinese population and further confirmed the significant association of -579G>T with gastric cancer but not lung cancer and suggested no significant association between -149C>T and risk of lung or gastric cancer. Collectively, DNMT3B -579G>T polymorphism is associated with gastric cancer risk in Chinese population, and the -579G>T may be used as a genetic biomarker to predict the risk of gastric cancer in Chinese population.
format Online
Article
Text
id pubmed-5762089
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher SAGE Publications
record_format MEDLINE/PubMed
spelling pubmed-57620892018-01-17 The DNMT3B -579G>T Polymorphism Is Significantly Associated With the Risk of Gastric Cancer but not Lung Cancer in Chinese Population Chen, Bifeng Wang, Jingdong Gu, Xiuli Zhang, Jingli Zhang, Jiankun Feng, Xianhong Technol Cancer Res Treat Original Articles The -149C>T and -579G>T, 2 single nucleotide polymorphisms in de novo methyltransferase 3B gene promoter, have been previously reported to potentially alter the promoter activity and to influence cancer risk. However, the results from previous studies remain conflicting rather than conclusive. In view of this, we conducted a case–control study and then a meta-analysis to examine the association between these 2 single-nucleotide polymorphisms with risk of lung and gastric cancer in Chinese population. The genotyping was performed by polymerase chain reaction-restriction fragment length polymorphism and confirmed by sequencing. In this case–control study, no significant association with lung or gastric cancer risk was observed for -149C>T, while -579G>T was significantly correlated with the risk of gastric cancer but not lung cancer. Moreover, haplotype analysis showed that haplotype -149T/-579 T, which carried the risk -579 T allele, significantly increased the susceptibility to gastric cancer. However, none of the haplotypes was associated with the risk of lung cancer. The following meta-analysis involved only Chinese population and further confirmed the significant association of -579G>T with gastric cancer but not lung cancer and suggested no significant association between -149C>T and risk of lung or gastric cancer. Collectively, DNMT3B -579G>T polymorphism is associated with gastric cancer risk in Chinese population, and the -579G>T may be used as a genetic biomarker to predict the risk of gastric cancer in Chinese population. SAGE Publications 2017-11-09 2017-12 /pmc/articles/PMC5762089/ /pubmed/29332452 http://dx.doi.org/10.1177/1533034617740475 Text en © The Author(s) 2017 http://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Articles
Chen, Bifeng
Wang, Jingdong
Gu, Xiuli
Zhang, Jingli
Zhang, Jiankun
Feng, Xianhong
The DNMT3B -579G>T Polymorphism Is Significantly Associated With the Risk of Gastric Cancer but not Lung Cancer in Chinese Population
title The DNMT3B -579G>T Polymorphism Is Significantly Associated With the Risk of Gastric Cancer but not Lung Cancer in Chinese Population
title_full The DNMT3B -579G>T Polymorphism Is Significantly Associated With the Risk of Gastric Cancer but not Lung Cancer in Chinese Population
title_fullStr The DNMT3B -579G>T Polymorphism Is Significantly Associated With the Risk of Gastric Cancer but not Lung Cancer in Chinese Population
title_full_unstemmed The DNMT3B -579G>T Polymorphism Is Significantly Associated With the Risk of Gastric Cancer but not Lung Cancer in Chinese Population
title_short The DNMT3B -579G>T Polymorphism Is Significantly Associated With the Risk of Gastric Cancer but not Lung Cancer in Chinese Population
title_sort dnmt3b -579g>t polymorphism is significantly associated with the risk of gastric cancer but not lung cancer in chinese population
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5762089/
https://www.ncbi.nlm.nih.gov/pubmed/29332452
http://dx.doi.org/10.1177/1533034617740475
work_keys_str_mv AT chenbifeng thednmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT wangjingdong thednmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT guxiuli thednmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT zhangjingli thednmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT zhangjiankun thednmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT fengxianhong thednmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT chenbifeng dnmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT wangjingdong dnmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT guxiuli dnmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT zhangjingli dnmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT zhangjiankun dnmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation
AT fengxianhong dnmt3b579gtpolymorphismissignificantlyassociatedwiththeriskofgastriccancerbutnotlungcancerinchinesepopulation