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Identification of novel diagnostic biomarkers for thyroid carcinoma

Thyroid carcinoma (THCA) is the most universal endocrine malignancy worldwide. Unfortunately, a limited number of large-scale analyses have been performed to identify biomarkers for THCA. Here, we conducted a meta-analysis using 505 THCA patients and 59 normal controls from The Cancer Genome Atlas....

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Autores principales: Wang, Xiliang, Zhang, Qing, Cai, Zhiming, Dai, Yifan, Mou, Lisha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5762342/
https://www.ncbi.nlm.nih.gov/pubmed/29340074
http://dx.doi.org/10.18632/oncotarget.22873
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author Wang, Xiliang
Zhang, Qing
Cai, Zhiming
Dai, Yifan
Mou, Lisha
author_facet Wang, Xiliang
Zhang, Qing
Cai, Zhiming
Dai, Yifan
Mou, Lisha
author_sort Wang, Xiliang
collection PubMed
description Thyroid carcinoma (THCA) is the most universal endocrine malignancy worldwide. Unfortunately, a limited number of large-scale analyses have been performed to identify biomarkers for THCA. Here, we conducted a meta-analysis using 505 THCA patients and 59 normal controls from The Cancer Genome Atlas. After identifying differentially expressed long non-coding RNA (lncRNA) and protein coding genes (PCG), we found vast difference in various lncRNA-PCG co-expressed pairs in THCA. A dysregulation network with scale-free topology was constructed. Four molecules (LA16c-380H5.2, RP11-203J24.8, MLF1 and SDC4) could potentially serve as diagnostic biomarkers of THCA with high sensitivity and specificity. We further represent a diagnostic panel with expression cutoff values. Our results demonstrate the potential application of those four molecules as novel independent biomarkers for THCA diagnosis.
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spelling pubmed-57623422018-01-16 Identification of novel diagnostic biomarkers for thyroid carcinoma Wang, Xiliang Zhang, Qing Cai, Zhiming Dai, Yifan Mou, Lisha Oncotarget Research Paper Thyroid carcinoma (THCA) is the most universal endocrine malignancy worldwide. Unfortunately, a limited number of large-scale analyses have been performed to identify biomarkers for THCA. Here, we conducted a meta-analysis using 505 THCA patients and 59 normal controls from The Cancer Genome Atlas. After identifying differentially expressed long non-coding RNA (lncRNA) and protein coding genes (PCG), we found vast difference in various lncRNA-PCG co-expressed pairs in THCA. A dysregulation network with scale-free topology was constructed. Four molecules (LA16c-380H5.2, RP11-203J24.8, MLF1 and SDC4) could potentially serve as diagnostic biomarkers of THCA with high sensitivity and specificity. We further represent a diagnostic panel with expression cutoff values. Our results demonstrate the potential application of those four molecules as novel independent biomarkers for THCA diagnosis. Impact Journals LLC 2017-12-04 /pmc/articles/PMC5762342/ /pubmed/29340074 http://dx.doi.org/10.18632/oncotarget.22873 Text en Copyright: © 2017 Wang et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Wang, Xiliang
Zhang, Qing
Cai, Zhiming
Dai, Yifan
Mou, Lisha
Identification of novel diagnostic biomarkers for thyroid carcinoma
title Identification of novel diagnostic biomarkers for thyroid carcinoma
title_full Identification of novel diagnostic biomarkers for thyroid carcinoma
title_fullStr Identification of novel diagnostic biomarkers for thyroid carcinoma
title_full_unstemmed Identification of novel diagnostic biomarkers for thyroid carcinoma
title_short Identification of novel diagnostic biomarkers for thyroid carcinoma
title_sort identification of novel diagnostic biomarkers for thyroid carcinoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5762342/
https://www.ncbi.nlm.nih.gov/pubmed/29340074
http://dx.doi.org/10.18632/oncotarget.22873
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