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Spectral separability and mapping potential of cassava leaf damage symptoms caused by whiteflies (Bemisia tabaci)

BACKGROUND: This study examines whether leaf spectra can be used to measure damage to cassava plants from whitefly (Bemisia tabaci), and the potential to translate measurements from leaf to landscape scale in eastern Africa. Symptoms of the cassava brown streak disease (CBSD) and cassava mosaic dise...

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Autores principales: Sims, Neil C, De Barro, Paul, Newnham, Glenn J, Kalyebi, Andrew, Macfadyen, Sarina, Malthus, Tim J
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Ltd 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5765403/
https://www.ncbi.nlm.nih.gov/pubmed/28851022
http://dx.doi.org/10.1002/ps.4718
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author Sims, Neil C
De Barro, Paul
Newnham, Glenn J
Kalyebi, Andrew
Macfadyen, Sarina
Malthus, Tim J
author_facet Sims, Neil C
De Barro, Paul
Newnham, Glenn J
Kalyebi, Andrew
Macfadyen, Sarina
Malthus, Tim J
author_sort Sims, Neil C
collection PubMed
description BACKGROUND: This study examines whether leaf spectra can be used to measure damage to cassava plants from whitefly (Bemisia tabaci), and the potential to translate measurements from leaf to landscape scale in eastern Africa. Symptoms of the cassava brown streak disease (CBSD) and cassava mosaic disease (CMD) viruses, and sooty mould (SM) blackening of lower leaves from whiteflies feeding on the upper leaves, were measured at the leaf scale with a high‐resolution spectroradiometer and a single photon avalanche diode (SPAD) meter, which retrieves relative chlorophyll concentration. Spectral measurements were compared to the five‐level visual scores used to assess the severity of each of the three damaging agents in the field, and also to leaf chemistry data. RESULTS: Leaves exhibiting severe CBSD and CMD were spectrally indistinguishable from leaves without any symptoms. Severe SM was spectrally distinctive but is likely to be difficult to map because of its occurrence in the lower crown. SPAD measurements were highly correlated with most foliar chemistry measurements and field scores of disease severity. Regression models between simulated Sentinel 2 bands, field scores and SPAD measurements were strongest using wavelengths with high importance weightings in random forest models. CONCLUSION: SPAD measurements are highly correlated to many foliar chemistry parameters, and should be considered for use in mapping disease severity over larger areas. Remaining challenges for mapping relate to the subtle expression of symptoms, the spatial distribution of disease severity within fields, and the small size and complex structure of the cassava fields themselves. © 2017 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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spelling pubmed-57654032018-01-17 Spectral separability and mapping potential of cassava leaf damage symptoms caused by whiteflies (Bemisia tabaci) Sims, Neil C De Barro, Paul Newnham, Glenn J Kalyebi, Andrew Macfadyen, Sarina Malthus, Tim J Pest Manag Sci Research Articles BACKGROUND: This study examines whether leaf spectra can be used to measure damage to cassava plants from whitefly (Bemisia tabaci), and the potential to translate measurements from leaf to landscape scale in eastern Africa. Symptoms of the cassava brown streak disease (CBSD) and cassava mosaic disease (CMD) viruses, and sooty mould (SM) blackening of lower leaves from whiteflies feeding on the upper leaves, were measured at the leaf scale with a high‐resolution spectroradiometer and a single photon avalanche diode (SPAD) meter, which retrieves relative chlorophyll concentration. Spectral measurements were compared to the five‐level visual scores used to assess the severity of each of the three damaging agents in the field, and also to leaf chemistry data. RESULTS: Leaves exhibiting severe CBSD and CMD were spectrally indistinguishable from leaves without any symptoms. Severe SM was spectrally distinctive but is likely to be difficult to map because of its occurrence in the lower crown. SPAD measurements were highly correlated with most foliar chemistry measurements and field scores of disease severity. Regression models between simulated Sentinel 2 bands, field scores and SPAD measurements were strongest using wavelengths with high importance weightings in random forest models. CONCLUSION: SPAD measurements are highly correlated to many foliar chemistry parameters, and should be considered for use in mapping disease severity over larger areas. Remaining challenges for mapping relate to the subtle expression of symptoms, the spatial distribution of disease severity within fields, and the small size and complex structure of the cassava fields themselves. © 2017 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry. John Wiley & Sons, Ltd 2017-10-24 2018-01 /pmc/articles/PMC5765403/ /pubmed/28851022 http://dx.doi.org/10.1002/ps.4718 Text en © 2017 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Sims, Neil C
De Barro, Paul
Newnham, Glenn J
Kalyebi, Andrew
Macfadyen, Sarina
Malthus, Tim J
Spectral separability and mapping potential of cassava leaf damage symptoms caused by whiteflies (Bemisia tabaci)
title Spectral separability and mapping potential of cassava leaf damage symptoms caused by whiteflies (Bemisia tabaci)
title_full Spectral separability and mapping potential of cassava leaf damage symptoms caused by whiteflies (Bemisia tabaci)
title_fullStr Spectral separability and mapping potential of cassava leaf damage symptoms caused by whiteflies (Bemisia tabaci)
title_full_unstemmed Spectral separability and mapping potential of cassava leaf damage symptoms caused by whiteflies (Bemisia tabaci)
title_short Spectral separability and mapping potential of cassava leaf damage symptoms caused by whiteflies (Bemisia tabaci)
title_sort spectral separability and mapping potential of cassava leaf damage symptoms caused by whiteflies (bemisia tabaci)
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5765403/
https://www.ncbi.nlm.nih.gov/pubmed/28851022
http://dx.doi.org/10.1002/ps.4718
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