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Ensemble learning method for the prediction of new bioactive molecules

Pharmacologically active molecules can provide remedies for a range of different illnesses and infections. Therefore, the search for such bioactive molecules has been an enduring mission. As such, there is a need to employ a more suitable, reliable, and robust classification method for enhancing the...

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Detalles Bibliográficos
Autores principales: Afolabi, Lateefat Temitope, Saeed, Faisal, Hashim, Haslinda, Petinrin, Olutomilayo Olayemi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5766097/
https://www.ncbi.nlm.nih.gov/pubmed/29329334
http://dx.doi.org/10.1371/journal.pone.0189538
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author Afolabi, Lateefat Temitope
Saeed, Faisal
Hashim, Haslinda
Petinrin, Olutomilayo Olayemi
author_facet Afolabi, Lateefat Temitope
Saeed, Faisal
Hashim, Haslinda
Petinrin, Olutomilayo Olayemi
author_sort Afolabi, Lateefat Temitope
collection PubMed
description Pharmacologically active molecules can provide remedies for a range of different illnesses and infections. Therefore, the search for such bioactive molecules has been an enduring mission. As such, there is a need to employ a more suitable, reliable, and robust classification method for enhancing the prediction of the existence of new bioactive molecules. In this paper, we adopt a recently developed combination of different boosting methods (Adaboost) for the prediction of new bioactive molecules. We conducted the research experiments utilizing the widely used MDL Drug Data Report (MDDR) database. The proposed boosting method generated better results than other machine learning methods. This finding suggests that the method is suitable for inclusion among the in silico tools for use in cheminformatics, computational chemistry and molecular biology.
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spelling pubmed-57660972018-01-23 Ensemble learning method for the prediction of new bioactive molecules Afolabi, Lateefat Temitope Saeed, Faisal Hashim, Haslinda Petinrin, Olutomilayo Olayemi PLoS One Research Article Pharmacologically active molecules can provide remedies for a range of different illnesses and infections. Therefore, the search for such bioactive molecules has been an enduring mission. As such, there is a need to employ a more suitable, reliable, and robust classification method for enhancing the prediction of the existence of new bioactive molecules. In this paper, we adopt a recently developed combination of different boosting methods (Adaboost) for the prediction of new bioactive molecules. We conducted the research experiments utilizing the widely used MDL Drug Data Report (MDDR) database. The proposed boosting method generated better results than other machine learning methods. This finding suggests that the method is suitable for inclusion among the in silico tools for use in cheminformatics, computational chemistry and molecular biology. Public Library of Science 2018-01-12 /pmc/articles/PMC5766097/ /pubmed/29329334 http://dx.doi.org/10.1371/journal.pone.0189538 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Afolabi, Lateefat Temitope
Saeed, Faisal
Hashim, Haslinda
Petinrin, Olutomilayo Olayemi
Ensemble learning method for the prediction of new bioactive molecules
title Ensemble learning method for the prediction of new bioactive molecules
title_full Ensemble learning method for the prediction of new bioactive molecules
title_fullStr Ensemble learning method for the prediction of new bioactive molecules
title_full_unstemmed Ensemble learning method for the prediction of new bioactive molecules
title_short Ensemble learning method for the prediction of new bioactive molecules
title_sort ensemble learning method for the prediction of new bioactive molecules
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5766097/
https://www.ncbi.nlm.nih.gov/pubmed/29329334
http://dx.doi.org/10.1371/journal.pone.0189538
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AT petinrinolutomilayoolayemi ensemblelearningmethodforthepredictionofnewbioactivemolecules