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Platelet protein biomarker panel for ovarian cancer diagnosis
BACKGROUND: Platelets support cancer growth and spread making platelet proteins candidates in the search for biomarkers. METHODS: Two-dimensional (2D) gel electrophoresis, Partial Least Squares Discriminant Analysis (PLS-DA), Western blot, DigiWest. RESULTS: PLS-DA of platelet protein expression in...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5767003/ https://www.ncbi.nlm.nih.gov/pubmed/29344361 http://dx.doi.org/10.1186/s40364-018-0118-y |
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author | Lomnytska, Marta Pinto, Rui Becker, Susanne Engström, Ulla Gustafsson, Sonja Björklund, Christina Templin, Markus Bergstrand, Jan Xu, Lei Widengren, Jerker Epstein, Elisabeth Franzén, Bo Auer, Gert |
author_facet | Lomnytska, Marta Pinto, Rui Becker, Susanne Engström, Ulla Gustafsson, Sonja Björklund, Christina Templin, Markus Bergstrand, Jan Xu, Lei Widengren, Jerker Epstein, Elisabeth Franzén, Bo Auer, Gert |
author_sort | Lomnytska, Marta |
collection | PubMed |
description | BACKGROUND: Platelets support cancer growth and spread making platelet proteins candidates in the search for biomarkers. METHODS: Two-dimensional (2D) gel electrophoresis, Partial Least Squares Discriminant Analysis (PLS-DA), Western blot, DigiWest. RESULTS: PLS-DA of platelet protein expression in 2D gels suggested differences between the International Federation of Gynaecology and Obstetrics (FIGO) stages III-IV of ovarian cancer, compared to benign adnexal lesions with a sensitivity of 96% and a specificity of 88%. A PLS-DA-based model correctly predicted 7 out of 8 cases of FIGO stages I-II of ovarian cancer after verification by western blot. Receiver-operator curve (ROC) analysis indicated a sensitivity of 83% and specificity of 76% at cut-off >0.5 (area under the curve (AUC) = 0.831, p < 0.0001) for detecting these cases. Validation on an independent set of samples by DigiWest with PLS-DA differentiated benign adnexal lesions and ovarian cancer, FIGO stages III-IV, with a sensitivity of 70% and a specificity of 83%. CONCLUSION: We identified a group of platelet protein biomarker candidates that can quantify the differential expression between ovarian cancer cases as compared to benign adnexal lesions. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40364-018-0118-y) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5767003 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-57670032018-01-17 Platelet protein biomarker panel for ovarian cancer diagnosis Lomnytska, Marta Pinto, Rui Becker, Susanne Engström, Ulla Gustafsson, Sonja Björklund, Christina Templin, Markus Bergstrand, Jan Xu, Lei Widengren, Jerker Epstein, Elisabeth Franzén, Bo Auer, Gert Biomark Res Research BACKGROUND: Platelets support cancer growth and spread making platelet proteins candidates in the search for biomarkers. METHODS: Two-dimensional (2D) gel electrophoresis, Partial Least Squares Discriminant Analysis (PLS-DA), Western blot, DigiWest. RESULTS: PLS-DA of platelet protein expression in 2D gels suggested differences between the International Federation of Gynaecology and Obstetrics (FIGO) stages III-IV of ovarian cancer, compared to benign adnexal lesions with a sensitivity of 96% and a specificity of 88%. A PLS-DA-based model correctly predicted 7 out of 8 cases of FIGO stages I-II of ovarian cancer after verification by western blot. Receiver-operator curve (ROC) analysis indicated a sensitivity of 83% and specificity of 76% at cut-off >0.5 (area under the curve (AUC) = 0.831, p < 0.0001) for detecting these cases. Validation on an independent set of samples by DigiWest with PLS-DA differentiated benign adnexal lesions and ovarian cancer, FIGO stages III-IV, with a sensitivity of 70% and a specificity of 83%. CONCLUSION: We identified a group of platelet protein biomarker candidates that can quantify the differential expression between ovarian cancer cases as compared to benign adnexal lesions. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40364-018-0118-y) contains supplementary material, which is available to authorized users. BioMed Central 2018-01-12 /pmc/articles/PMC5767003/ /pubmed/29344361 http://dx.doi.org/10.1186/s40364-018-0118-y Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Lomnytska, Marta Pinto, Rui Becker, Susanne Engström, Ulla Gustafsson, Sonja Björklund, Christina Templin, Markus Bergstrand, Jan Xu, Lei Widengren, Jerker Epstein, Elisabeth Franzén, Bo Auer, Gert Platelet protein biomarker panel for ovarian cancer diagnosis |
title | Platelet protein biomarker panel for ovarian cancer diagnosis |
title_full | Platelet protein biomarker panel for ovarian cancer diagnosis |
title_fullStr | Platelet protein biomarker panel for ovarian cancer diagnosis |
title_full_unstemmed | Platelet protein biomarker panel for ovarian cancer diagnosis |
title_short | Platelet protein biomarker panel for ovarian cancer diagnosis |
title_sort | platelet protein biomarker panel for ovarian cancer diagnosis |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5767003/ https://www.ncbi.nlm.nih.gov/pubmed/29344361 http://dx.doi.org/10.1186/s40364-018-0118-y |
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