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Myopia in Chinese families shows linkage to 10q26.13
PURPOSE: To determine genetic linkage between myopia and Han Chinese patients with a family history of the disease. METHODS: One hundred seventy-six Han Chinese patients from 34 extended families were given eye examinations, and mean spherical equivalent (MSE) in diopters (D) was calculated by addin...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Vision
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5767476/ https://www.ncbi.nlm.nih.gov/pubmed/29383007 |
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author | Musolf, Anthony M. Simpson, Claire L. Long, Kyle A. Moiz, Bilal A. Lewis, Deyana D. Middlebrooks, Candace D. Portas, Laura Murgia, Federico Ciner, Elise B. Bailey-Wilson, Joan E. Stambolian, Dwight |
author_facet | Musolf, Anthony M. Simpson, Claire L. Long, Kyle A. Moiz, Bilal A. Lewis, Deyana D. Middlebrooks, Candace D. Portas, Laura Murgia, Federico Ciner, Elise B. Bailey-Wilson, Joan E. Stambolian, Dwight |
author_sort | Musolf, Anthony M. |
collection | PubMed |
description | PURPOSE: To determine genetic linkage between myopia and Han Chinese patients with a family history of the disease. METHODS: One hundred seventy-six Han Chinese patients from 34 extended families were given eye examinations, and mean spherical equivalent (MSE) in diopters (D) was calculated by adding the spherical component of the refraction to one-half the cylindrical component and taking the average of both eyes. The MSE was converted to a binary phenotype, where all patients with an MSE of -1.00 D or less were coded as affected. Unaffected individuals had an MSE greater than 0.00 D (ages 21 years and up), +1.50 (ages 11–20), or +2.00 D (ages 6–10 years). Individuals between the given upper threshold and −1.00 were coded as unknown. Patients were genotyped on an exome chip. Three types of linkage analyses were performed: single-variant two-point, multipoint, and collapsed haplotype pattern (CHP) variant two-point. RESULTS: The CHP variant two-point results identified a significant peak (heterogeneity logarithm of the odds [HLOD] = 3.73) at 10q26.13 in TACC2. The single-variant two-point and multipoint analyses showed highly suggestive linkage to the same region. The single-variant two-point results identified 25 suggestive variants at HTRA1, also at 10q26.13. CONCLUSIONS: We report a significant genetic linkage between myopia and Han Chinese patients at 10q26.13. 10q26.13 contains several good candidate genes, such as TACC2 and the known age-related macular degeneration gene HTRA1. Targeted sequencing of the region is planned to identify the causal variant(s). |
format | Online Article Text |
id | pubmed-5767476 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Molecular Vision |
record_format | MEDLINE/PubMed |
spelling | pubmed-57674762018-01-30 Myopia in Chinese families shows linkage to 10q26.13 Musolf, Anthony M. Simpson, Claire L. Long, Kyle A. Moiz, Bilal A. Lewis, Deyana D. Middlebrooks, Candace D. Portas, Laura Murgia, Federico Ciner, Elise B. Bailey-Wilson, Joan E. Stambolian, Dwight Mol Vis Research Article PURPOSE: To determine genetic linkage between myopia and Han Chinese patients with a family history of the disease. METHODS: One hundred seventy-six Han Chinese patients from 34 extended families were given eye examinations, and mean spherical equivalent (MSE) in diopters (D) was calculated by adding the spherical component of the refraction to one-half the cylindrical component and taking the average of both eyes. The MSE was converted to a binary phenotype, where all patients with an MSE of -1.00 D or less were coded as affected. Unaffected individuals had an MSE greater than 0.00 D (ages 21 years and up), +1.50 (ages 11–20), or +2.00 D (ages 6–10 years). Individuals between the given upper threshold and −1.00 were coded as unknown. Patients were genotyped on an exome chip. Three types of linkage analyses were performed: single-variant two-point, multipoint, and collapsed haplotype pattern (CHP) variant two-point. RESULTS: The CHP variant two-point results identified a significant peak (heterogeneity logarithm of the odds [HLOD] = 3.73) at 10q26.13 in TACC2. The single-variant two-point and multipoint analyses showed highly suggestive linkage to the same region. The single-variant two-point results identified 25 suggestive variants at HTRA1, also at 10q26.13. CONCLUSIONS: We report a significant genetic linkage between myopia and Han Chinese patients at 10q26.13. 10q26.13 contains several good candidate genes, such as TACC2 and the known age-related macular degeneration gene HTRA1. Targeted sequencing of the region is planned to identify the causal variant(s). Molecular Vision 2018-01-14 /pmc/articles/PMC5767476/ /pubmed/29383007 Text en Copyright © 2018 Molecular Vision. http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited, used for non-commercial purposes, and is not altered or transformed. |
spellingShingle | Research Article Musolf, Anthony M. Simpson, Claire L. Long, Kyle A. Moiz, Bilal A. Lewis, Deyana D. Middlebrooks, Candace D. Portas, Laura Murgia, Federico Ciner, Elise B. Bailey-Wilson, Joan E. Stambolian, Dwight Myopia in Chinese families shows linkage to 10q26.13 |
title | Myopia in Chinese families shows linkage to 10q26.13 |
title_full | Myopia in Chinese families shows linkage to 10q26.13 |
title_fullStr | Myopia in Chinese families shows linkage to 10q26.13 |
title_full_unstemmed | Myopia in Chinese families shows linkage to 10q26.13 |
title_short | Myopia in Chinese families shows linkage to 10q26.13 |
title_sort | myopia in chinese families shows linkage to 10q26.13 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5767476/ https://www.ncbi.nlm.nih.gov/pubmed/29383007 |
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