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Computer aided epitope design as a peptide vaccine component against Lassa virus

Lassa virus (LASV) is an arena virus causing hemorrhagic fever and it is endemic in several regions of West Africa. The disease-causing virus records high mortality rate in endemic regions due to lack of appropriate treatment and prevention strategies. Therefore, it is of interest to design and deve...

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Autores principales: Faisal, Ar-Rafi Md., Imtiaz, Syed Hassan, Zerin, Tasnim, Rahman, Tania, Shekhar, Hossain Uddin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5767920/
https://www.ncbi.nlm.nih.gov/pubmed/29379262
http://dx.doi.org/10.6026/97320630013417
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author Faisal, Ar-Rafi Md.
Imtiaz, Syed Hassan
Zerin, Tasnim
Rahman, Tania
Shekhar, Hossain Uddin
author_facet Faisal, Ar-Rafi Md.
Imtiaz, Syed Hassan
Zerin, Tasnim
Rahman, Tania
Shekhar, Hossain Uddin
author_sort Faisal, Ar-Rafi Md.
collection PubMed
description Lassa virus (LASV) is an arena virus causing hemorrhagic fever and it is endemic in several regions of West Africa. The disease-causing virus records high mortality rate in endemic regions due to lack of appropriate treatment and prevention strategies. Therefore, it is of interest to design and develop viable vaccine components against the virus. We used the Lassa virus envelope glyco-proteins as a vaccine target to identify linear peptides as potential epitopes with immunogenic properties by computer aided epitope prediction tools. We report a T-cell epitope 'LLGTFTWTL' and a B-cell epitope 'AELKCFGNTAVAKCNE' with predicted potential immunogenicity for further in vivo and in vitro consideration.
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spelling pubmed-57679202018-01-29 Computer aided epitope design as a peptide vaccine component against Lassa virus Faisal, Ar-Rafi Md. Imtiaz, Syed Hassan Zerin, Tasnim Rahman, Tania Shekhar, Hossain Uddin Bioinformation Hypothesis Lassa virus (LASV) is an arena virus causing hemorrhagic fever and it is endemic in several regions of West Africa. The disease-causing virus records high mortality rate in endemic regions due to lack of appropriate treatment and prevention strategies. Therefore, it is of interest to design and develop viable vaccine components against the virus. We used the Lassa virus envelope glyco-proteins as a vaccine target to identify linear peptides as potential epitopes with immunogenic properties by computer aided epitope prediction tools. We report a T-cell epitope 'LLGTFTWTL' and a B-cell epitope 'AELKCFGNTAVAKCNE' with predicted potential immunogenicity for further in vivo and in vitro consideration. Biomedical Informatics 2017-12-31 /pmc/articles/PMC5767920/ /pubmed/29379262 http://dx.doi.org/10.6026/97320630013417 Text en © 2017 Biomedical Informatics http://creativecommons.org/licenses/by/3.0/ This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.
spellingShingle Hypothesis
Faisal, Ar-Rafi Md.
Imtiaz, Syed Hassan
Zerin, Tasnim
Rahman, Tania
Shekhar, Hossain Uddin
Computer aided epitope design as a peptide vaccine component against Lassa virus
title Computer aided epitope design as a peptide vaccine component against Lassa virus
title_full Computer aided epitope design as a peptide vaccine component against Lassa virus
title_fullStr Computer aided epitope design as a peptide vaccine component against Lassa virus
title_full_unstemmed Computer aided epitope design as a peptide vaccine component against Lassa virus
title_short Computer aided epitope design as a peptide vaccine component against Lassa virus
title_sort computer aided epitope design as a peptide vaccine component against lassa virus
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5767920/
https://www.ncbi.nlm.nih.gov/pubmed/29379262
http://dx.doi.org/10.6026/97320630013417
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