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Validation of prediction models: examining temporal and geographic stability of baseline risk and estimated covariate effects

BACKGROUND: Stability in baseline risk and estimated predictor effects both geographically and temporally is a desirable property of clinical prediction models. However, this issue has received little attention in the methodological literature. Our objective was to examine methods for assessing temp...

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Autores principales: Austin, Peter C., van Klaveren, David, Vergouwe, Yvonne, Nieboer, Daan, Lee, Douglas S., Steyerberg, Ewout W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5770216/
https://www.ncbi.nlm.nih.gov/pubmed/29350215
http://dx.doi.org/10.1186/s41512-017-0012-3
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author Austin, Peter C.
van Klaveren, David
Vergouwe, Yvonne
Nieboer, Daan
Lee, Douglas S.
Steyerberg, Ewout W.
author_facet Austin, Peter C.
van Klaveren, David
Vergouwe, Yvonne
Nieboer, Daan
Lee, Douglas S.
Steyerberg, Ewout W.
author_sort Austin, Peter C.
collection PubMed
description BACKGROUND: Stability in baseline risk and estimated predictor effects both geographically and temporally is a desirable property of clinical prediction models. However, this issue has received little attention in the methodological literature. Our objective was to examine methods for assessing temporal and geographic heterogeneity in baseline risk and predictor effects in prediction models. METHODS: We studied 14,857 patients hospitalized with heart failure at 90 hospitals in Ontario, Canada, in two time periods. We focussed on geographic and temporal variation in baseline risk (intercept) and predictor effects (regression coefficients) of the EFFECT-HF mortality model for predicting 1-year mortality in patients hospitalized for heart failure. We used random effects logistic regression models for the 14,857 patients. RESULTS: The baseline risk of mortality displayed moderate geographic variation, with the hospital-specific probability of 1-year mortality for a reference patient lying between 0.168 and 0.290 for 95% of hospitals. Furthermore, the odds of death were 11% lower in the second period than in the first period. However, we found minimal geographic or temporal variation in predictor effects. Among 11 tests of differences in time for predictor variables, only one had a modestly significant P value (0.03). CONCLUSIONS: This study illustrates how temporal and geographic heterogeneity of prediction models can be assessed in settings with a large sample of patients from a large number of centers at different time periods.
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spelling pubmed-57702162018-01-16 Validation of prediction models: examining temporal and geographic stability of baseline risk and estimated covariate effects Austin, Peter C. van Klaveren, David Vergouwe, Yvonne Nieboer, Daan Lee, Douglas S. Steyerberg, Ewout W. Diagn Progn Res Research BACKGROUND: Stability in baseline risk and estimated predictor effects both geographically and temporally is a desirable property of clinical prediction models. However, this issue has received little attention in the methodological literature. Our objective was to examine methods for assessing temporal and geographic heterogeneity in baseline risk and predictor effects in prediction models. METHODS: We studied 14,857 patients hospitalized with heart failure at 90 hospitals in Ontario, Canada, in two time periods. We focussed on geographic and temporal variation in baseline risk (intercept) and predictor effects (regression coefficients) of the EFFECT-HF mortality model for predicting 1-year mortality in patients hospitalized for heart failure. We used random effects logistic regression models for the 14,857 patients. RESULTS: The baseline risk of mortality displayed moderate geographic variation, with the hospital-specific probability of 1-year mortality for a reference patient lying between 0.168 and 0.290 for 95% of hospitals. Furthermore, the odds of death were 11% lower in the second period than in the first period. However, we found minimal geographic or temporal variation in predictor effects. Among 11 tests of differences in time for predictor variables, only one had a modestly significant P value (0.03). CONCLUSIONS: This study illustrates how temporal and geographic heterogeneity of prediction models can be assessed in settings with a large sample of patients from a large number of centers at different time periods. BioMed Central 2017-04-13 /pmc/articles/PMC5770216/ /pubmed/29350215 http://dx.doi.org/10.1186/s41512-017-0012-3 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Austin, Peter C.
van Klaveren, David
Vergouwe, Yvonne
Nieboer, Daan
Lee, Douglas S.
Steyerberg, Ewout W.
Validation of prediction models: examining temporal and geographic stability of baseline risk and estimated covariate effects
title Validation of prediction models: examining temporal and geographic stability of baseline risk and estimated covariate effects
title_full Validation of prediction models: examining temporal and geographic stability of baseline risk and estimated covariate effects
title_fullStr Validation of prediction models: examining temporal and geographic stability of baseline risk and estimated covariate effects
title_full_unstemmed Validation of prediction models: examining temporal and geographic stability of baseline risk and estimated covariate effects
title_short Validation of prediction models: examining temporal and geographic stability of baseline risk and estimated covariate effects
title_sort validation of prediction models: examining temporal and geographic stability of baseline risk and estimated covariate effects
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5770216/
https://www.ncbi.nlm.nih.gov/pubmed/29350215
http://dx.doi.org/10.1186/s41512-017-0012-3
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