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Perfect Detection of Spikes in the Linear Sub-threshold Dynamics of Point Neurons
Spiking neuronal networks are usually simulated with one of three main schemes: the classical time-driven and event-driven schemes, and the more recent hybrid scheme. All three schemes evolve the state of a neuron through a series of checkpoints: equally spaced in the first scheme and determined neu...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5770835/ https://www.ncbi.nlm.nih.gov/pubmed/29379430 http://dx.doi.org/10.3389/fninf.2017.00075 |
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author | Krishnan, Jeyashree Porta Mana, PierGianLuca Helias, Moritz Diesmann, Markus Di Napoli, Edoardo |
author_facet | Krishnan, Jeyashree Porta Mana, PierGianLuca Helias, Moritz Diesmann, Markus Di Napoli, Edoardo |
author_sort | Krishnan, Jeyashree |
collection | PubMed |
description | Spiking neuronal networks are usually simulated with one of three main schemes: the classical time-driven and event-driven schemes, and the more recent hybrid scheme. All three schemes evolve the state of a neuron through a series of checkpoints: equally spaced in the first scheme and determined neuron-wise by spike events in the latter two. The time-driven and the hybrid scheme determine whether the membrane potential of a neuron crosses a threshold at the end of the time interval between consecutive checkpoints. Threshold crossing can, however, occur within the interval even if this test is negative. Spikes can therefore be missed. The present work offers an alternative geometric point of view on neuronal dynamics, and derives, implements, and benchmarks a method for perfect retrospective spike detection. This method can be applied to neuron models with affine or linear subthreshold dynamics. The idea behind the method is to propagate the threshold with a time-inverted dynamics, testing whether the threshold crosses the neuron state to be evolved, rather than vice versa. Algebraically this translates into a set of inequalities necessary and sufficient for threshold crossing. This test is slower than the imperfect one, but can be optimized in several ways. Comparison confirms earlier results that the imperfect tests rarely miss spikes (less than a fraction 1/10(8) of missed spikes) in biologically relevant settings. |
format | Online Article Text |
id | pubmed-5770835 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-57708352018-01-29 Perfect Detection of Spikes in the Linear Sub-threshold Dynamics of Point Neurons Krishnan, Jeyashree Porta Mana, PierGianLuca Helias, Moritz Diesmann, Markus Di Napoli, Edoardo Front Neuroinform Neuroscience Spiking neuronal networks are usually simulated with one of three main schemes: the classical time-driven and event-driven schemes, and the more recent hybrid scheme. All three schemes evolve the state of a neuron through a series of checkpoints: equally spaced in the first scheme and determined neuron-wise by spike events in the latter two. The time-driven and the hybrid scheme determine whether the membrane potential of a neuron crosses a threshold at the end of the time interval between consecutive checkpoints. Threshold crossing can, however, occur within the interval even if this test is negative. Spikes can therefore be missed. The present work offers an alternative geometric point of view on neuronal dynamics, and derives, implements, and benchmarks a method for perfect retrospective spike detection. This method can be applied to neuron models with affine or linear subthreshold dynamics. The idea behind the method is to propagate the threshold with a time-inverted dynamics, testing whether the threshold crosses the neuron state to be evolved, rather than vice versa. Algebraically this translates into a set of inequalities necessary and sufficient for threshold crossing. This test is slower than the imperfect one, but can be optimized in several ways. Comparison confirms earlier results that the imperfect tests rarely miss spikes (less than a fraction 1/10(8) of missed spikes) in biologically relevant settings. Frontiers Media S.A. 2018-01-05 /pmc/articles/PMC5770835/ /pubmed/29379430 http://dx.doi.org/10.3389/fninf.2017.00075 Text en Copyright © 2018 Krishnan, Porta Mana, Helias, Diesmann and Di Napoli. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Krishnan, Jeyashree Porta Mana, PierGianLuca Helias, Moritz Diesmann, Markus Di Napoli, Edoardo Perfect Detection of Spikes in the Linear Sub-threshold Dynamics of Point Neurons |
title | Perfect Detection of Spikes in the Linear Sub-threshold Dynamics of Point Neurons |
title_full | Perfect Detection of Spikes in the Linear Sub-threshold Dynamics of Point Neurons |
title_fullStr | Perfect Detection of Spikes in the Linear Sub-threshold Dynamics of Point Neurons |
title_full_unstemmed | Perfect Detection of Spikes in the Linear Sub-threshold Dynamics of Point Neurons |
title_short | Perfect Detection of Spikes in the Linear Sub-threshold Dynamics of Point Neurons |
title_sort | perfect detection of spikes in the linear sub-threshold dynamics of point neurons |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5770835/ https://www.ncbi.nlm.nih.gov/pubmed/29379430 http://dx.doi.org/10.3389/fninf.2017.00075 |
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