Cargando…

Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma

AIM: In our previous study, we have built a nine-gene (GPC3, HGF, ANXA1, FOS, SPAG9, HSPA1B, CXCR4, PFN1, and CALR) expression detection system based on the GeXP system. Based on peripheral blood and GeXP, we aimed to analyze the results of genes expression by different multi-parameter analysis meth...

Descripción completa

Detalles Bibliográficos
Autores principales: Xie, Hui, Xue, Yao-Qin, Liu, Peng, Zhang, Peng-Jun, Tian, Sheng-Tao, Yang, Zhao, Guo, Zhi, Wang, Hua-Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Baishideng Publishing Group Inc 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5776398/
https://www.ncbi.nlm.nih.gov/pubmed/29391759
http://dx.doi.org/10.3748/wjg.v24.i3.371
_version_ 1783294076758523904
author Xie, Hui
Xue, Yao-Qin
Liu, Peng
Zhang, Peng-Jun
Tian, Sheng-Tao
Yang, Zhao
Guo, Zhi
Wang, Hua-Ming
author_facet Xie, Hui
Xue, Yao-Qin
Liu, Peng
Zhang, Peng-Jun
Tian, Sheng-Tao
Yang, Zhao
Guo, Zhi
Wang, Hua-Ming
author_sort Xie, Hui
collection PubMed
description AIM: In our previous study, we have built a nine-gene (GPC3, HGF, ANXA1, FOS, SPAG9, HSPA1B, CXCR4, PFN1, and CALR) expression detection system based on the GeXP system. Based on peripheral blood and GeXP, we aimed to analyze the results of genes expression by different multi-parameter analysis methods and build a diagnostic model to classify hepatocellular carcinoma (HCC) patients and healthy people. METHODS: Logistic regression analysis, discriminant analysis, classification tree analysis, and artificial neural network were used for the multi-parameter gene expression analysis method. One hundred and three patients with early HCC and 54 age-matched healthy normal controls were used to build a diagnostic model. Fifty-two patients with early HCC and 34 healthy people were used for validation. The area under the curve, sensitivity, and specificity were used as diagnostic indicators. RESULTS: Artificial neural network of the total nine genes had the best diagnostic value, and the AUC, sensitivity, and specificity were 0.943, 98%, and 85%, respectively. At last, 52 HCC patients and 34 healthy normal controls were used for validation. The sensitivity and specificity were 96% and 86%, respectively. CONCLUSION: Multi-parameter analysis methods may increase the diagnostic value compared to single factor analysis and they may be a trend of the clinical diagnosis in the future.
format Online
Article
Text
id pubmed-5776398
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Baishideng Publishing Group Inc
record_format MEDLINE/PubMed
spelling pubmed-57763982018-02-01 Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma Xie, Hui Xue, Yao-Qin Liu, Peng Zhang, Peng-Jun Tian, Sheng-Tao Yang, Zhao Guo, Zhi Wang, Hua-Ming World J Gastroenterol Case Control Study AIM: In our previous study, we have built a nine-gene (GPC3, HGF, ANXA1, FOS, SPAG9, HSPA1B, CXCR4, PFN1, and CALR) expression detection system based on the GeXP system. Based on peripheral blood and GeXP, we aimed to analyze the results of genes expression by different multi-parameter analysis methods and build a diagnostic model to classify hepatocellular carcinoma (HCC) patients and healthy people. METHODS: Logistic regression analysis, discriminant analysis, classification tree analysis, and artificial neural network were used for the multi-parameter gene expression analysis method. One hundred and three patients with early HCC and 54 age-matched healthy normal controls were used to build a diagnostic model. Fifty-two patients with early HCC and 34 healthy people were used for validation. The area under the curve, sensitivity, and specificity were used as diagnostic indicators. RESULTS: Artificial neural network of the total nine genes had the best diagnostic value, and the AUC, sensitivity, and specificity were 0.943, 98%, and 85%, respectively. At last, 52 HCC patients and 34 healthy normal controls were used for validation. The sensitivity and specificity were 96% and 86%, respectively. CONCLUSION: Multi-parameter analysis methods may increase the diagnostic value compared to single factor analysis and they may be a trend of the clinical diagnosis in the future. Baishideng Publishing Group Inc 2018-01-21 2018-01-21 /pmc/articles/PMC5776398/ /pubmed/29391759 http://dx.doi.org/10.3748/wjg.v24.i3.371 Text en ©The Author(s) 2018. Published by Baishideng Publishing Group Inc. All rights reserved. http://creativecommons.org/licenses/by-nc/4.0/ This article is an open-access article which was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial.
spellingShingle Case Control Study
Xie, Hui
Xue, Yao-Qin
Liu, Peng
Zhang, Peng-Jun
Tian, Sheng-Tao
Yang, Zhao
Guo, Zhi
Wang, Hua-Ming
Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma
title Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma
title_full Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma
title_fullStr Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma
title_full_unstemmed Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma
title_short Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma
title_sort multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma
topic Case Control Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5776398/
https://www.ncbi.nlm.nih.gov/pubmed/29391759
http://dx.doi.org/10.3748/wjg.v24.i3.371
work_keys_str_mv AT xiehui multiparametergeneexpressionprofilingofperipheralbloodforearlydetectionofhepatocellularcarcinoma
AT xueyaoqin multiparametergeneexpressionprofilingofperipheralbloodforearlydetectionofhepatocellularcarcinoma
AT liupeng multiparametergeneexpressionprofilingofperipheralbloodforearlydetectionofhepatocellularcarcinoma
AT zhangpengjun multiparametergeneexpressionprofilingofperipheralbloodforearlydetectionofhepatocellularcarcinoma
AT tianshengtao multiparametergeneexpressionprofilingofperipheralbloodforearlydetectionofhepatocellularcarcinoma
AT yangzhao multiparametergeneexpressionprofilingofperipheralbloodforearlydetectionofhepatocellularcarcinoma
AT guozhi multiparametergeneexpressionprofilingofperipheralbloodforearlydetectionofhepatocellularcarcinoma
AT wanghuaming multiparametergeneexpressionprofilingofperipheralbloodforearlydetectionofhepatocellularcarcinoma