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Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma
AIM: In our previous study, we have built a nine-gene (GPC3, HGF, ANXA1, FOS, SPAG9, HSPA1B, CXCR4, PFN1, and CALR) expression detection system based on the GeXP system. Based on peripheral blood and GeXP, we aimed to analyze the results of genes expression by different multi-parameter analysis meth...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Baishideng Publishing Group Inc
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5776398/ https://www.ncbi.nlm.nih.gov/pubmed/29391759 http://dx.doi.org/10.3748/wjg.v24.i3.371 |
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author | Xie, Hui Xue, Yao-Qin Liu, Peng Zhang, Peng-Jun Tian, Sheng-Tao Yang, Zhao Guo, Zhi Wang, Hua-Ming |
author_facet | Xie, Hui Xue, Yao-Qin Liu, Peng Zhang, Peng-Jun Tian, Sheng-Tao Yang, Zhao Guo, Zhi Wang, Hua-Ming |
author_sort | Xie, Hui |
collection | PubMed |
description | AIM: In our previous study, we have built a nine-gene (GPC3, HGF, ANXA1, FOS, SPAG9, HSPA1B, CXCR4, PFN1, and CALR) expression detection system based on the GeXP system. Based on peripheral blood and GeXP, we aimed to analyze the results of genes expression by different multi-parameter analysis methods and build a diagnostic model to classify hepatocellular carcinoma (HCC) patients and healthy people. METHODS: Logistic regression analysis, discriminant analysis, classification tree analysis, and artificial neural network were used for the multi-parameter gene expression analysis method. One hundred and three patients with early HCC and 54 age-matched healthy normal controls were used to build a diagnostic model. Fifty-two patients with early HCC and 34 healthy people were used for validation. The area under the curve, sensitivity, and specificity were used as diagnostic indicators. RESULTS: Artificial neural network of the total nine genes had the best diagnostic value, and the AUC, sensitivity, and specificity were 0.943, 98%, and 85%, respectively. At last, 52 HCC patients and 34 healthy normal controls were used for validation. The sensitivity and specificity were 96% and 86%, respectively. CONCLUSION: Multi-parameter analysis methods may increase the diagnostic value compared to single factor analysis and they may be a trend of the clinical diagnosis in the future. |
format | Online Article Text |
id | pubmed-5776398 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Baishideng Publishing Group Inc |
record_format | MEDLINE/PubMed |
spelling | pubmed-57763982018-02-01 Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma Xie, Hui Xue, Yao-Qin Liu, Peng Zhang, Peng-Jun Tian, Sheng-Tao Yang, Zhao Guo, Zhi Wang, Hua-Ming World J Gastroenterol Case Control Study AIM: In our previous study, we have built a nine-gene (GPC3, HGF, ANXA1, FOS, SPAG9, HSPA1B, CXCR4, PFN1, and CALR) expression detection system based on the GeXP system. Based on peripheral blood and GeXP, we aimed to analyze the results of genes expression by different multi-parameter analysis methods and build a diagnostic model to classify hepatocellular carcinoma (HCC) patients and healthy people. METHODS: Logistic regression analysis, discriminant analysis, classification tree analysis, and artificial neural network were used for the multi-parameter gene expression analysis method. One hundred and three patients with early HCC and 54 age-matched healthy normal controls were used to build a diagnostic model. Fifty-two patients with early HCC and 34 healthy people were used for validation. The area under the curve, sensitivity, and specificity were used as diagnostic indicators. RESULTS: Artificial neural network of the total nine genes had the best diagnostic value, and the AUC, sensitivity, and specificity were 0.943, 98%, and 85%, respectively. At last, 52 HCC patients and 34 healthy normal controls were used for validation. The sensitivity and specificity were 96% and 86%, respectively. CONCLUSION: Multi-parameter analysis methods may increase the diagnostic value compared to single factor analysis and they may be a trend of the clinical diagnosis in the future. Baishideng Publishing Group Inc 2018-01-21 2018-01-21 /pmc/articles/PMC5776398/ /pubmed/29391759 http://dx.doi.org/10.3748/wjg.v24.i3.371 Text en ©The Author(s) 2018. Published by Baishideng Publishing Group Inc. All rights reserved. http://creativecommons.org/licenses/by-nc/4.0/ This article is an open-access article which was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. |
spellingShingle | Case Control Study Xie, Hui Xue, Yao-Qin Liu, Peng Zhang, Peng-Jun Tian, Sheng-Tao Yang, Zhao Guo, Zhi Wang, Hua-Ming Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma |
title | Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma |
title_full | Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma |
title_fullStr | Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma |
title_full_unstemmed | Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma |
title_short | Multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma |
title_sort | multi-parameter gene expression profiling of peripheral blood for early detection of hepatocellular carcinoma |
topic | Case Control Study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5776398/ https://www.ncbi.nlm.nih.gov/pubmed/29391759 http://dx.doi.org/10.3748/wjg.v24.i3.371 |
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