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Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets
Aqueous microdroplets (<1.3 µm in diameter on average) containing 15 mM d-ribose, 15 mM phosphoric acid, and 5 mM of a nucleobase (uracil, adenine, cytosine, or hypoxanthine) are electrosprayed from a capillary at +5 kV into a mass spectrometer at room temperature and 1 atm pressure with 3 mM div...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5776833/ https://www.ncbi.nlm.nih.gov/pubmed/29255025 http://dx.doi.org/10.1073/pnas.1718559115 |
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author | Nam, Inho Nam, Hong Gil Zare, Richard N. |
author_facet | Nam, Inho Nam, Hong Gil Zare, Richard N. |
author_sort | Nam, Inho |
collection | PubMed |
description | Aqueous microdroplets (<1.3 µm in diameter on average) containing 15 mM d-ribose, 15 mM phosphoric acid, and 5 mM of a nucleobase (uracil, adenine, cytosine, or hypoxanthine) are electrosprayed from a capillary at +5 kV into a mass spectrometer at room temperature and 1 atm pressure with 3 mM divalent magnesium ion (Mg(2+)) as a catalyst. Mass spectra show the formation of ribonucleosides that comprise a four-letter alphabet of RNA with a yield of 2.5% of uridine (U), 2.5% of adenosine (A), 0.7% of cytidine (C), and 1.7% of inosine (I) during the flight time of ∼50 µs. In the case of uridine, no catalyst is required. An aqueous solution containing guanine cannot be generated under the same conditions given the extreme insolubility of guanine in water. However, inosine can base pair with cytidine and thus substitute for guanosine. Thus, a full set of ribonucleosides to generate the purine–pyrimidine base pairs A-U and I-C are spontaneously generated in aqueous microdroplets under similar mild conditions. |
format | Online Article Text |
id | pubmed-5776833 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-57768332018-01-23 Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets Nam, Inho Nam, Hong Gil Zare, Richard N. Proc Natl Acad Sci U S A Physical Sciences Aqueous microdroplets (<1.3 µm in diameter on average) containing 15 mM d-ribose, 15 mM phosphoric acid, and 5 mM of a nucleobase (uracil, adenine, cytosine, or hypoxanthine) are electrosprayed from a capillary at +5 kV into a mass spectrometer at room temperature and 1 atm pressure with 3 mM divalent magnesium ion (Mg(2+)) as a catalyst. Mass spectra show the formation of ribonucleosides that comprise a four-letter alphabet of RNA with a yield of 2.5% of uridine (U), 2.5% of adenosine (A), 0.7% of cytidine (C), and 1.7% of inosine (I) during the flight time of ∼50 µs. In the case of uridine, no catalyst is required. An aqueous solution containing guanine cannot be generated under the same conditions given the extreme insolubility of guanine in water. However, inosine can base pair with cytidine and thus substitute for guanosine. Thus, a full set of ribonucleosides to generate the purine–pyrimidine base pairs A-U and I-C are spontaneously generated in aqueous microdroplets under similar mild conditions. National Academy of Sciences 2018-01-02 2017-12-18 /pmc/articles/PMC5776833/ /pubmed/29255025 http://dx.doi.org/10.1073/pnas.1718559115 Text en Copyright © 2017 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Physical Sciences Nam, Inho Nam, Hong Gil Zare, Richard N. Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets |
title | Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets |
title_full | Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets |
title_fullStr | Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets |
title_full_unstemmed | Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets |
title_short | Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets |
title_sort | abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets |
topic | Physical Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5776833/ https://www.ncbi.nlm.nih.gov/pubmed/29255025 http://dx.doi.org/10.1073/pnas.1718559115 |
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