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Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets

Aqueous microdroplets (<1.3 µm in diameter on average) containing 15 mM d-ribose, 15 mM phosphoric acid, and 5 mM of a nucleobase (uracil, adenine, cytosine, or hypoxanthine) are electrosprayed from a capillary at +5 kV into a mass spectrometer at room temperature and 1 atm pressure with 3 mM div...

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Autores principales: Nam, Inho, Nam, Hong Gil, Zare, Richard N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5776833/
https://www.ncbi.nlm.nih.gov/pubmed/29255025
http://dx.doi.org/10.1073/pnas.1718559115
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author Nam, Inho
Nam, Hong Gil
Zare, Richard N.
author_facet Nam, Inho
Nam, Hong Gil
Zare, Richard N.
author_sort Nam, Inho
collection PubMed
description Aqueous microdroplets (<1.3 µm in diameter on average) containing 15 mM d-ribose, 15 mM phosphoric acid, and 5 mM of a nucleobase (uracil, adenine, cytosine, or hypoxanthine) are electrosprayed from a capillary at +5 kV into a mass spectrometer at room temperature and 1 atm pressure with 3 mM divalent magnesium ion (Mg(2+)) as a catalyst. Mass spectra show the formation of ribonucleosides that comprise a four-letter alphabet of RNA with a yield of 2.5% of uridine (U), 2.5% of adenosine (A), 0.7% of cytidine (C), and 1.7% of inosine (I) during the flight time of ∼50 µs. In the case of uridine, no catalyst is required. An aqueous solution containing guanine cannot be generated under the same conditions given the extreme insolubility of guanine in water. However, inosine can base pair with cytidine and thus substitute for guanosine. Thus, a full set of ribonucleosides to generate the purine–pyrimidine base pairs A-U and I-C are spontaneously generated in aqueous microdroplets under similar mild conditions.
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spelling pubmed-57768332018-01-23 Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets Nam, Inho Nam, Hong Gil Zare, Richard N. Proc Natl Acad Sci U S A Physical Sciences Aqueous microdroplets (<1.3 µm in diameter on average) containing 15 mM d-ribose, 15 mM phosphoric acid, and 5 mM of a nucleobase (uracil, adenine, cytosine, or hypoxanthine) are electrosprayed from a capillary at +5 kV into a mass spectrometer at room temperature and 1 atm pressure with 3 mM divalent magnesium ion (Mg(2+)) as a catalyst. Mass spectra show the formation of ribonucleosides that comprise a four-letter alphabet of RNA with a yield of 2.5% of uridine (U), 2.5% of adenosine (A), 0.7% of cytidine (C), and 1.7% of inosine (I) during the flight time of ∼50 µs. In the case of uridine, no catalyst is required. An aqueous solution containing guanine cannot be generated under the same conditions given the extreme insolubility of guanine in water. However, inosine can base pair with cytidine and thus substitute for guanosine. Thus, a full set of ribonucleosides to generate the purine–pyrimidine base pairs A-U and I-C are spontaneously generated in aqueous microdroplets under similar mild conditions. National Academy of Sciences 2018-01-02 2017-12-18 /pmc/articles/PMC5776833/ /pubmed/29255025 http://dx.doi.org/10.1073/pnas.1718559115 Text en Copyright © 2017 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Physical Sciences
Nam, Inho
Nam, Hong Gil
Zare, Richard N.
Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets
title Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets
title_full Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets
title_fullStr Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets
title_full_unstemmed Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets
title_short Abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets
title_sort abiotic synthesis of purine and pyrimidine ribonucleosides in aqueous microdroplets
topic Physical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5776833/
https://www.ncbi.nlm.nih.gov/pubmed/29255025
http://dx.doi.org/10.1073/pnas.1718559115
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