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Crystal structure of 8-(4-methylphenyl)-2′-deoxyadenosine hemihydrate
In the asymmetric unit, equalling the unit cell (triclinic, P1, Z = 1), two molecules of the title compound, 8-(4-methylphenyl)-d-2′-deoxyadenosine, C(17)H(19)N(5)O(3), are present, with distinct conformations of the two sugar moieties, together with one solvent water molecule. All three ribos...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5778474/ https://www.ncbi.nlm.nih.gov/pubmed/29416880 http://dx.doi.org/10.1107/S2056989017017212 |
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author | Ardhapure, Ajaykumar V. Sanghvi, Yogesh S. Borozdina, Yulia Kapdi, Anant Ramakant Schulzke, Carola |
author_facet | Ardhapure, Ajaykumar V. Sanghvi, Yogesh S. Borozdina, Yulia Kapdi, Anant Ramakant Schulzke, Carola |
author_sort | Ardhapure, Ajaykumar V. |
collection | PubMed |
description | In the asymmetric unit, equalling the unit cell (triclinic, P1, Z = 1), two molecules of the title compound, 8-(4-methylphenyl)-d-2′-deoxyadenosine, C(17)H(19)N(5)O(3), are present, with distinct conformations of the two sugar moieties, together with one solvent water molecule. All three ribose O atoms are involved in hydrogen bonding and the crystal packing is largely determined by hydrogen-bonding or hydrogen–heteroatom interactions (O—H⋯O, O—H⋯N, N—H⋯O, C—H⋯O and C—H⋯N) with one independent molecule directly linked to four neighbouring molecules and the other molecule directly linked to six neighbouring molecules. The two independent molecules of the asymmetric unit display three weak intramolecular C—H-to-heteroatom contacts, two of which are very similar despite the different conformations of the deoxyribosyl moieties. The aromatic ring systems of both molecules are in proximity to each other and somehow aligned, though not coplanar. The absolute structures of the two molecules were assumed with reference to the reactant 8-bromo-d-2′-deoxyadenosine as they could not be determined crystallographically. |
format | Online Article Text |
id | pubmed-5778474 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-57784742018-02-07 Crystal structure of 8-(4-methylphenyl)-2′-deoxyadenosine hemihydrate Ardhapure, Ajaykumar V. Sanghvi, Yogesh S. Borozdina, Yulia Kapdi, Anant Ramakant Schulzke, Carola Acta Crystallogr E Crystallogr Commun Research Communications In the asymmetric unit, equalling the unit cell (triclinic, P1, Z = 1), two molecules of the title compound, 8-(4-methylphenyl)-d-2′-deoxyadenosine, C(17)H(19)N(5)O(3), are present, with distinct conformations of the two sugar moieties, together with one solvent water molecule. All three ribose O atoms are involved in hydrogen bonding and the crystal packing is largely determined by hydrogen-bonding or hydrogen–heteroatom interactions (O—H⋯O, O—H⋯N, N—H⋯O, C—H⋯O and C—H⋯N) with one independent molecule directly linked to four neighbouring molecules and the other molecule directly linked to six neighbouring molecules. The two independent molecules of the asymmetric unit display three weak intramolecular C—H-to-heteroatom contacts, two of which are very similar despite the different conformations of the deoxyribosyl moieties. The aromatic ring systems of both molecules are in proximity to each other and somehow aligned, though not coplanar. The absolute structures of the two molecules were assumed with reference to the reactant 8-bromo-d-2′-deoxyadenosine as they could not be determined crystallographically. International Union of Crystallography 2018-01-01 /pmc/articles/PMC5778474/ /pubmed/29416880 http://dx.doi.org/10.1107/S2056989017017212 Text en © Ardhapure et al. 2018 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/ |
spellingShingle | Research Communications Ardhapure, Ajaykumar V. Sanghvi, Yogesh S. Borozdina, Yulia Kapdi, Anant Ramakant Schulzke, Carola Crystal structure of 8-(4-methylphenyl)-2′-deoxyadenosine hemihydrate |
title | Crystal structure of 8-(4-methylphenyl)-2′-deoxyadenosine hemihydrate |
title_full | Crystal structure of 8-(4-methylphenyl)-2′-deoxyadenosine hemihydrate |
title_fullStr | Crystal structure of 8-(4-methylphenyl)-2′-deoxyadenosine hemihydrate |
title_full_unstemmed | Crystal structure of 8-(4-methylphenyl)-2′-deoxyadenosine hemihydrate |
title_short | Crystal structure of 8-(4-methylphenyl)-2′-deoxyadenosine hemihydrate |
title_sort | crystal structure of 8-(4-methylphenyl)-2′-deoxyadenosine hemihydrate |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5778474/ https://www.ncbi.nlm.nih.gov/pubmed/29416880 http://dx.doi.org/10.1107/S2056989017017212 |
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