Cargando…

Disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors

The development of tracking methods for automatically quantifying individual behavior and social interactions in animal groups has open up new perspectives for building quantitative and predictive models of collective behavior. In this work, we combine extensive data analyses with a modeling approac...

Descripción completa

Detalles Bibliográficos
Autores principales: Calovi, Daniel S., Litchinko, Alexandra, Lecheval, Valentin, Lopez, Ugo, Pérez Escudero, Alfonso, Chaté, Hugues, Sire, Clément, Theraulaz, Guy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5783427/
https://www.ncbi.nlm.nih.gov/pubmed/29324853
http://dx.doi.org/10.1371/journal.pcbi.1005933
_version_ 1783295275119411200
author Calovi, Daniel S.
Litchinko, Alexandra
Lecheval, Valentin
Lopez, Ugo
Pérez Escudero, Alfonso
Chaté, Hugues
Sire, Clément
Theraulaz, Guy
author_facet Calovi, Daniel S.
Litchinko, Alexandra
Lecheval, Valentin
Lopez, Ugo
Pérez Escudero, Alfonso
Chaté, Hugues
Sire, Clément
Theraulaz, Guy
author_sort Calovi, Daniel S.
collection PubMed
description The development of tracking methods for automatically quantifying individual behavior and social interactions in animal groups has open up new perspectives for building quantitative and predictive models of collective behavior. In this work, we combine extensive data analyses with a modeling approach to measure, disentangle, and reconstruct the actual functional form of interactions involved in the coordination of swimming in Rummy-nose tetra (Hemigrammus rhodostomus). This species of fish performs burst-and-coast swimming behavior that consists of sudden heading changes combined with brief accelerations followed by quasi-passive, straight decelerations. We quantify the spontaneous stochastic behavior of a fish and the interactions that govern wall avoidance and the reaction to a neighboring fish, the latter by exploiting general symmetry constraints for the interactions. In contrast with previous experimental works, we find that both attraction and alignment behaviors control the reaction of fish to a neighbor. We then exploit these results to build a model of spontaneous burst-and-coast swimming and interactions of fish, with all parameters being estimated or directly measured from experiments. This model quantitatively reproduces the key features of the motion and spatial distributions observed in experiments with a single fish and with two fish. This demonstrates the power of our method that exploits large amounts of data for disentangling and fully characterizing the interactions that govern collective behaviors in animals groups.
format Online
Article
Text
id pubmed-5783427
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-57834272018-02-08 Disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors Calovi, Daniel S. Litchinko, Alexandra Lecheval, Valentin Lopez, Ugo Pérez Escudero, Alfonso Chaté, Hugues Sire, Clément Theraulaz, Guy PLoS Comput Biol Research Article The development of tracking methods for automatically quantifying individual behavior and social interactions in animal groups has open up new perspectives for building quantitative and predictive models of collective behavior. In this work, we combine extensive data analyses with a modeling approach to measure, disentangle, and reconstruct the actual functional form of interactions involved in the coordination of swimming in Rummy-nose tetra (Hemigrammus rhodostomus). This species of fish performs burst-and-coast swimming behavior that consists of sudden heading changes combined with brief accelerations followed by quasi-passive, straight decelerations. We quantify the spontaneous stochastic behavior of a fish and the interactions that govern wall avoidance and the reaction to a neighboring fish, the latter by exploiting general symmetry constraints for the interactions. In contrast with previous experimental works, we find that both attraction and alignment behaviors control the reaction of fish to a neighbor. We then exploit these results to build a model of spontaneous burst-and-coast swimming and interactions of fish, with all parameters being estimated or directly measured from experiments. This model quantitatively reproduces the key features of the motion and spatial distributions observed in experiments with a single fish and with two fish. This demonstrates the power of our method that exploits large amounts of data for disentangling and fully characterizing the interactions that govern collective behaviors in animals groups. Public Library of Science 2018-01-11 /pmc/articles/PMC5783427/ /pubmed/29324853 http://dx.doi.org/10.1371/journal.pcbi.1005933 Text en © 2018 Calovi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Calovi, Daniel S.
Litchinko, Alexandra
Lecheval, Valentin
Lopez, Ugo
Pérez Escudero, Alfonso
Chaté, Hugues
Sire, Clément
Theraulaz, Guy
Disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors
title Disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors
title_full Disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors
title_fullStr Disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors
title_full_unstemmed Disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors
title_short Disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors
title_sort disentangling and modeling interactions in fish with burst-and-coast swimming reveal distinct alignment and attraction behaviors
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5783427/
https://www.ncbi.nlm.nih.gov/pubmed/29324853
http://dx.doi.org/10.1371/journal.pcbi.1005933
work_keys_str_mv AT calovidaniels disentanglingandmodelinginteractionsinfishwithburstandcoastswimmingrevealdistinctalignmentandattractionbehaviors
AT litchinkoalexandra disentanglingandmodelinginteractionsinfishwithburstandcoastswimmingrevealdistinctalignmentandattractionbehaviors
AT lechevalvalentin disentanglingandmodelinginteractionsinfishwithburstandcoastswimmingrevealdistinctalignmentandattractionbehaviors
AT lopezugo disentanglingandmodelinginteractionsinfishwithburstandcoastswimmingrevealdistinctalignmentandattractionbehaviors
AT perezescuderoalfonso disentanglingandmodelinginteractionsinfishwithburstandcoastswimmingrevealdistinctalignmentandattractionbehaviors
AT chatehugues disentanglingandmodelinginteractionsinfishwithburstandcoastswimmingrevealdistinctalignmentandattractionbehaviors
AT sireclement disentanglingandmodelinginteractionsinfishwithburstandcoastswimmingrevealdistinctalignmentandattractionbehaviors
AT theraulazguy disentanglingandmodelinginteractionsinfishwithburstandcoastswimmingrevealdistinctalignmentandattractionbehaviors