Cargando…

Perceiving the Usefulness of the National Cancer Institute Metathesaurus for Enriching NCIt with Topological Patterns

The National Cancer Institute Thesaurus (NCIt), developed and maintained by the National Cancer Institute, is an important reference terminology in the cancer domain. As a controlled terminology needs to continuously incorporate new concepts to enrich its conceptual content, automated and semi-autom...

Descripción completa

Detalles Bibliográficos
Autores principales: He, Zhe, Chen, Yan, Geller, James
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5785238/
https://www.ncbi.nlm.nih.gov/pubmed/29295222
_version_ 1783295598340866048
author He, Zhe
Chen, Yan
Geller, James
author_facet He, Zhe
Chen, Yan
Geller, James
author_sort He, Zhe
collection PubMed
description The National Cancer Institute Thesaurus (NCIt), developed and maintained by the National Cancer Institute, is an important reference terminology in the cancer domain. As a controlled terminology needs to continuously incorporate new concepts to enrich its conceptual content, automated and semi-automated methods for identifying potential new concepts are in high demand. We have previously developed a topological-pattern-based method for identifying new concepts in a controlled terminology to enrich another terminology, using the UMLS Metathesaurus. In this work, we utilize this method with the National Cancer Institute Metathesaurus to identify new concepts for NCIt. While previous work was only oriented towards identifying candidate import concepts for human review, we are now also adding an algorithmic method to evaluate candidate concepts and reject a well defined group of them.
format Online
Article
Text
id pubmed-5785238
institution National Center for Biotechnology Information
language English
publishDate 2017
record_format MEDLINE/PubMed
spelling pubmed-57852382018-01-25 Perceiving the Usefulness of the National Cancer Institute Metathesaurus for Enriching NCIt with Topological Patterns He, Zhe Chen, Yan Geller, James Stud Health Technol Inform Article The National Cancer Institute Thesaurus (NCIt), developed and maintained by the National Cancer Institute, is an important reference terminology in the cancer domain. As a controlled terminology needs to continuously incorporate new concepts to enrich its conceptual content, automated and semi-automated methods for identifying potential new concepts are in high demand. We have previously developed a topological-pattern-based method for identifying new concepts in a controlled terminology to enrich another terminology, using the UMLS Metathesaurus. In this work, we utilize this method with the National Cancer Institute Metathesaurus to identify new concepts for NCIt. While previous work was only oriented towards identifying candidate import concepts for human review, we are now also adding an algorithmic method to evaluate candidate concepts and reject a well defined group of them. 2017 /pmc/articles/PMC5785238/ /pubmed/29295222 Text en This article is published online with Open Access by IOS Press and distributed under the terms of the Creative Commons Attribution Non-Commercial (http://creativecommons.org/licenses/by-nc-nd/4.0/) License 4.0 (CC BY-NC 4.0).
spellingShingle Article
He, Zhe
Chen, Yan
Geller, James
Perceiving the Usefulness of the National Cancer Institute Metathesaurus for Enriching NCIt with Topological Patterns
title Perceiving the Usefulness of the National Cancer Institute Metathesaurus for Enriching NCIt with Topological Patterns
title_full Perceiving the Usefulness of the National Cancer Institute Metathesaurus for Enriching NCIt with Topological Patterns
title_fullStr Perceiving the Usefulness of the National Cancer Institute Metathesaurus for Enriching NCIt with Topological Patterns
title_full_unstemmed Perceiving the Usefulness of the National Cancer Institute Metathesaurus for Enriching NCIt with Topological Patterns
title_short Perceiving the Usefulness of the National Cancer Institute Metathesaurus for Enriching NCIt with Topological Patterns
title_sort perceiving the usefulness of the national cancer institute metathesaurus for enriching ncit with topological patterns
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5785238/
https://www.ncbi.nlm.nih.gov/pubmed/29295222
work_keys_str_mv AT hezhe perceivingtheusefulnessofthenationalcancerinstitutemetathesaurusforenrichingncitwithtopologicalpatterns
AT chenyan perceivingtheusefulnessofthenationalcancerinstitutemetathesaurusforenrichingncitwithtopologicalpatterns
AT gellerjames perceivingtheusefulnessofthenationalcancerinstitutemetathesaurusforenrichingncitwithtopologicalpatterns