Cargando…

Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans

BACKGROUND: Chronic obstructive pulmonary disease (COPD) is a debilitating lung disease. To date, a large number of clinical studies have been conducted to investigate the association between genetic variations and COPD. However, little is known regarding the genetic susceptibility of Koreans to thi...

Descripción completa

Detalles Bibliográficos
Autores principales: Kim, Woo Jin, Park, Hyo Jin, Choi, Yang Ji, Kwon, Eun Young, Kim, Bo Min, Lee, Jin Hwa, Chang, Jung Hyun, Lee Kang, Jihee, Choi, Ji Ha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Academy of Medical Sciences 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5785628/
https://www.ncbi.nlm.nih.gov/pubmed/29359540
http://dx.doi.org/10.3346/jkms.2018.33.e56
_version_ 1783295636942094336
author Kim, Woo Jin
Park, Hyo Jin
Choi, Yang Ji
Kwon, Eun Young
Kim, Bo Min
Lee, Jin Hwa
Chang, Jung Hyun
Lee Kang, Jihee
Choi, Ji Ha
author_facet Kim, Woo Jin
Park, Hyo Jin
Choi, Yang Ji
Kwon, Eun Young
Kim, Bo Min
Lee, Jin Hwa
Chang, Jung Hyun
Lee Kang, Jihee
Choi, Ji Ha
author_sort Kim, Woo Jin
collection PubMed
description BACKGROUND: Chronic obstructive pulmonary disease (COPD) is a debilitating lung disease. To date, a large number of clinical studies have been conducted to investigate the association between genetic variations and COPD. However, little is known regarding the genetic susceptibility of Koreans to this disease. MER receptor tyrosine kinase (MERTK) plays important roles in the inhibition of inflammation and in the clearance of apoptotic cells. Here, we investigated the association between genetic variations in MERTK and the development of COPD in Koreans. METHODS: We conducted genetic analysis of MERTK using genomic DNA samples from 87 patients with COPD and 88 healthy controls and compared the frequency of each variation or haplotype between the patient and control groups. Subsequently, the effect of each variation was evaluated using in vitro assays. RESULTS: Ten variations were identified in this study, four of them for the first time. In addition, we found that the frequency of each variation or haplotype was comparable between the patient and control groups. However, we observed that the frequency for the wild-type haplotype was higher in the control group, compared to that in the group of patients with COPD, in the subgroup analysis of current smokers, although the difference was not statistically significant (P = 0.080). In in vitro assays, we observed that none of the variations affected the activity of the promoter or the expression of MERTK. CONCLUSION: Our findings indicate that the susceptibility to COPD is not related to the genetic variations or haplotypes of MERTK in Koreans.
format Online
Article
Text
id pubmed-5785628
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher The Korean Academy of Medical Sciences
record_format MEDLINE/PubMed
spelling pubmed-57856282018-02-12 Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans Kim, Woo Jin Park, Hyo Jin Choi, Yang Ji Kwon, Eun Young Kim, Bo Min Lee, Jin Hwa Chang, Jung Hyun Lee Kang, Jihee Choi, Ji Ha J Korean Med Sci Original Article BACKGROUND: Chronic obstructive pulmonary disease (COPD) is a debilitating lung disease. To date, a large number of clinical studies have been conducted to investigate the association between genetic variations and COPD. However, little is known regarding the genetic susceptibility of Koreans to this disease. MER receptor tyrosine kinase (MERTK) plays important roles in the inhibition of inflammation and in the clearance of apoptotic cells. Here, we investigated the association between genetic variations in MERTK and the development of COPD in Koreans. METHODS: We conducted genetic analysis of MERTK using genomic DNA samples from 87 patients with COPD and 88 healthy controls and compared the frequency of each variation or haplotype between the patient and control groups. Subsequently, the effect of each variation was evaluated using in vitro assays. RESULTS: Ten variations were identified in this study, four of them for the first time. In addition, we found that the frequency of each variation or haplotype was comparable between the patient and control groups. However, we observed that the frequency for the wild-type haplotype was higher in the control group, compared to that in the group of patients with COPD, in the subgroup analysis of current smokers, although the difference was not statistically significant (P = 0.080). In in vitro assays, we observed that none of the variations affected the activity of the promoter or the expression of MERTK. CONCLUSION: Our findings indicate that the susceptibility to COPD is not related to the genetic variations or haplotypes of MERTK in Koreans. The Korean Academy of Medical Sciences 2018-01-09 /pmc/articles/PMC5785628/ /pubmed/29359540 http://dx.doi.org/10.3346/jkms.2018.33.e56 Text en © 2018 The Korean Academy of Medical Sciences. https://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Kim, Woo Jin
Park, Hyo Jin
Choi, Yang Ji
Kwon, Eun Young
Kim, Bo Min
Lee, Jin Hwa
Chang, Jung Hyun
Lee Kang, Jihee
Choi, Ji Ha
Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans
title Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans
title_full Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans
title_fullStr Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans
title_full_unstemmed Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans
title_short Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans
title_sort association between genetic variations of mertk and chronic obstructive pulmonary disease in koreans
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5785628/
https://www.ncbi.nlm.nih.gov/pubmed/29359540
http://dx.doi.org/10.3346/jkms.2018.33.e56
work_keys_str_mv AT kimwoojin associationbetweengeneticvariationsofmertkandchronicobstructivepulmonarydiseaseinkoreans
AT parkhyojin associationbetweengeneticvariationsofmertkandchronicobstructivepulmonarydiseaseinkoreans
AT choiyangji associationbetweengeneticvariationsofmertkandchronicobstructivepulmonarydiseaseinkoreans
AT kwoneunyoung associationbetweengeneticvariationsofmertkandchronicobstructivepulmonarydiseaseinkoreans
AT kimbomin associationbetweengeneticvariationsofmertkandchronicobstructivepulmonarydiseaseinkoreans
AT leejinhwa associationbetweengeneticvariationsofmertkandchronicobstructivepulmonarydiseaseinkoreans
AT changjunghyun associationbetweengeneticvariationsofmertkandchronicobstructivepulmonarydiseaseinkoreans
AT leekangjihee associationbetweengeneticvariationsofmertkandchronicobstructivepulmonarydiseaseinkoreans
AT choijiha associationbetweengeneticvariationsofmertkandchronicobstructivepulmonarydiseaseinkoreans