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Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans
BACKGROUND: Chronic obstructive pulmonary disease (COPD) is a debilitating lung disease. To date, a large number of clinical studies have been conducted to investigate the association between genetic variations and COPD. However, little is known regarding the genetic susceptibility of Koreans to thi...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Korean Academy of Medical Sciences
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5785628/ https://www.ncbi.nlm.nih.gov/pubmed/29359540 http://dx.doi.org/10.3346/jkms.2018.33.e56 |
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author | Kim, Woo Jin Park, Hyo Jin Choi, Yang Ji Kwon, Eun Young Kim, Bo Min Lee, Jin Hwa Chang, Jung Hyun Lee Kang, Jihee Choi, Ji Ha |
author_facet | Kim, Woo Jin Park, Hyo Jin Choi, Yang Ji Kwon, Eun Young Kim, Bo Min Lee, Jin Hwa Chang, Jung Hyun Lee Kang, Jihee Choi, Ji Ha |
author_sort | Kim, Woo Jin |
collection | PubMed |
description | BACKGROUND: Chronic obstructive pulmonary disease (COPD) is a debilitating lung disease. To date, a large number of clinical studies have been conducted to investigate the association between genetic variations and COPD. However, little is known regarding the genetic susceptibility of Koreans to this disease. MER receptor tyrosine kinase (MERTK) plays important roles in the inhibition of inflammation and in the clearance of apoptotic cells. Here, we investigated the association between genetic variations in MERTK and the development of COPD in Koreans. METHODS: We conducted genetic analysis of MERTK using genomic DNA samples from 87 patients with COPD and 88 healthy controls and compared the frequency of each variation or haplotype between the patient and control groups. Subsequently, the effect of each variation was evaluated using in vitro assays. RESULTS: Ten variations were identified in this study, four of them for the first time. In addition, we found that the frequency of each variation or haplotype was comparable between the patient and control groups. However, we observed that the frequency for the wild-type haplotype was higher in the control group, compared to that in the group of patients with COPD, in the subgroup analysis of current smokers, although the difference was not statistically significant (P = 0.080). In in vitro assays, we observed that none of the variations affected the activity of the promoter or the expression of MERTK. CONCLUSION: Our findings indicate that the susceptibility to COPD is not related to the genetic variations or haplotypes of MERTK in Koreans. |
format | Online Article Text |
id | pubmed-5785628 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | The Korean Academy of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-57856282018-02-12 Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans Kim, Woo Jin Park, Hyo Jin Choi, Yang Ji Kwon, Eun Young Kim, Bo Min Lee, Jin Hwa Chang, Jung Hyun Lee Kang, Jihee Choi, Ji Ha J Korean Med Sci Original Article BACKGROUND: Chronic obstructive pulmonary disease (COPD) is a debilitating lung disease. To date, a large number of clinical studies have been conducted to investigate the association between genetic variations and COPD. However, little is known regarding the genetic susceptibility of Koreans to this disease. MER receptor tyrosine kinase (MERTK) plays important roles in the inhibition of inflammation and in the clearance of apoptotic cells. Here, we investigated the association between genetic variations in MERTK and the development of COPD in Koreans. METHODS: We conducted genetic analysis of MERTK using genomic DNA samples from 87 patients with COPD and 88 healthy controls and compared the frequency of each variation or haplotype between the patient and control groups. Subsequently, the effect of each variation was evaluated using in vitro assays. RESULTS: Ten variations were identified in this study, four of them for the first time. In addition, we found that the frequency of each variation or haplotype was comparable between the patient and control groups. However, we observed that the frequency for the wild-type haplotype was higher in the control group, compared to that in the group of patients with COPD, in the subgroup analysis of current smokers, although the difference was not statistically significant (P = 0.080). In in vitro assays, we observed that none of the variations affected the activity of the promoter or the expression of MERTK. CONCLUSION: Our findings indicate that the susceptibility to COPD is not related to the genetic variations or haplotypes of MERTK in Koreans. The Korean Academy of Medical Sciences 2018-01-09 /pmc/articles/PMC5785628/ /pubmed/29359540 http://dx.doi.org/10.3346/jkms.2018.33.e56 Text en © 2018 The Korean Academy of Medical Sciences. https://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Kim, Woo Jin Park, Hyo Jin Choi, Yang Ji Kwon, Eun Young Kim, Bo Min Lee, Jin Hwa Chang, Jung Hyun Lee Kang, Jihee Choi, Ji Ha Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans |
title | Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans |
title_full | Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans |
title_fullStr | Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans |
title_full_unstemmed | Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans |
title_short | Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans |
title_sort | association between genetic variations of mertk and chronic obstructive pulmonary disease in koreans |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5785628/ https://www.ncbi.nlm.nih.gov/pubmed/29359540 http://dx.doi.org/10.3346/jkms.2018.33.e56 |
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