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Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy
Stargardt disease-4 (STGD4) is an autosomal dominant complex, genetically heterogeneous macular degeneration/dystrophy (MD) disorder. In this paper, we used targeted next generation sequencing and multiple molecular dynamics analyses to identify and characterize a disease-causing genetic variant in...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5787432/ https://www.ncbi.nlm.nih.gov/pubmed/29416601 http://dx.doi.org/10.18632/oncotarget.22343 |
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author | Imani, Saber Cheng, Jingliang Shasaltaneh, Marzieh Dehghan Wei, Chunli Yang, Lisha Fu, Shangyi Zou, Hui Khan, Md. Asaduzzaman Zhang, Xianqin Chen, Hanchun Zhang, Dianzheng Duan, Chengxia Lv, Hongbin Li, Yumei Chen, Rui Fu, Junjiang |
author_facet | Imani, Saber Cheng, Jingliang Shasaltaneh, Marzieh Dehghan Wei, Chunli Yang, Lisha Fu, Shangyi Zou, Hui Khan, Md. Asaduzzaman Zhang, Xianqin Chen, Hanchun Zhang, Dianzheng Duan, Chengxia Lv, Hongbin Li, Yumei Chen, Rui Fu, Junjiang |
author_sort | Imani, Saber |
collection | PubMed |
description | Stargardt disease-4 (STGD4) is an autosomal dominant complex, genetically heterogeneous macular degeneration/dystrophy (MD) disorder. In this paper, we used targeted next generation sequencing and multiple molecular dynamics analyses to identify and characterize a disease-causing genetic variant in four generations of a Chinese family with STGD4-like MD. We found a novel heterozygous missense mutation, c.734T>C (p.L245P) in the PROM1 gene. Structurally, this mutation most likely impairs PROM1 protein stability, flexibility, and amino acid interaction network after changing the amino acid residue Leucine into Proline in the basic helix-loop-helix leucine zipper domain. Molecular dynamic simulation and principal component analysis provide compelling evidence that this PROM1 mutation contributes to disease causativeness or susceptibility variants in patients with STGD4-like MD. Thus, this finding defines new approaches in genetic characterization, accurate diagnosis, and prevention of STGD4-like MD. |
format | Online Article Text |
id | pubmed-5787432 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-57874322018-02-07 Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy Imani, Saber Cheng, Jingliang Shasaltaneh, Marzieh Dehghan Wei, Chunli Yang, Lisha Fu, Shangyi Zou, Hui Khan, Md. Asaduzzaman Zhang, Xianqin Chen, Hanchun Zhang, Dianzheng Duan, Chengxia Lv, Hongbin Li, Yumei Chen, Rui Fu, Junjiang Oncotarget Research Paper: Chromosome Stargardt disease-4 (STGD4) is an autosomal dominant complex, genetically heterogeneous macular degeneration/dystrophy (MD) disorder. In this paper, we used targeted next generation sequencing and multiple molecular dynamics analyses to identify and characterize a disease-causing genetic variant in four generations of a Chinese family with STGD4-like MD. We found a novel heterozygous missense mutation, c.734T>C (p.L245P) in the PROM1 gene. Structurally, this mutation most likely impairs PROM1 protein stability, flexibility, and amino acid interaction network after changing the amino acid residue Leucine into Proline in the basic helix-loop-helix leucine zipper domain. Molecular dynamic simulation and principal component analysis provide compelling evidence that this PROM1 mutation contributes to disease causativeness or susceptibility variants in patients with STGD4-like MD. Thus, this finding defines new approaches in genetic characterization, accurate diagnosis, and prevention of STGD4-like MD. Impact Journals LLC 2017-11-09 /pmc/articles/PMC5787432/ /pubmed/29416601 http://dx.doi.org/10.18632/oncotarget.22343 Text en Copyright: © 2018 Imani et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper: Chromosome Imani, Saber Cheng, Jingliang Shasaltaneh, Marzieh Dehghan Wei, Chunli Yang, Lisha Fu, Shangyi Zou, Hui Khan, Md. Asaduzzaman Zhang, Xianqin Chen, Hanchun Zhang, Dianzheng Duan, Chengxia Lv, Hongbin Li, Yumei Chen, Rui Fu, Junjiang Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy |
title | Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy |
title_full | Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy |
title_fullStr | Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy |
title_full_unstemmed | Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy |
title_short | Genetic identification and molecular modeling characterization reveal a novel PROM1 mutation in Stargardt4-like macular dystrophy |
title_sort | genetic identification and molecular modeling characterization reveal a novel prom1 mutation in stargardt4-like macular dystrophy |
topic | Research Paper: Chromosome |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5787432/ https://www.ncbi.nlm.nih.gov/pubmed/29416601 http://dx.doi.org/10.18632/oncotarget.22343 |
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