Cargando…

Polyphasic characterization of bacteria obtained from upland rice cultivated in Cerrado soil()

This work aimed to characterize 20 isolates obtained from upland rice plants, based on phenotypic (morphology, enzymatic activity, inorganic phosphate solubilization, carbon source use, antagonism), genotypic assays (16S rRNA sequencing) and plant growth promotion. Results showed a great morphologic...

Descripción completa

Detalles Bibliográficos
Autores principales: Braga, Lívia Fabiana, Oliveira, Fênix Araújo de, Couto, Eva Aparecida Prado do, Santos, Karina Freire d’Eça Nogueira, Ferreira, Enderson Petrônio de Brito, Martin-Didonet, Claudia Cristina Garcia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5790645/
https://www.ncbi.nlm.nih.gov/pubmed/28838812
http://dx.doi.org/10.1016/j.bjm.2017.04.004
_version_ 1783296475506147328
author Braga, Lívia Fabiana
Oliveira, Fênix Araújo de
Couto, Eva Aparecida Prado do
Santos, Karina Freire d’Eça Nogueira
Ferreira, Enderson Petrônio de Brito
Martin-Didonet, Claudia Cristina Garcia
author_facet Braga, Lívia Fabiana
Oliveira, Fênix Araújo de
Couto, Eva Aparecida Prado do
Santos, Karina Freire d’Eça Nogueira
Ferreira, Enderson Petrônio de Brito
Martin-Didonet, Claudia Cristina Garcia
author_sort Braga, Lívia Fabiana
collection PubMed
description This work aimed to characterize 20 isolates obtained from upland rice plants, based on phenotypic (morphology, enzymatic activity, inorganic phosphate solubilization, carbon source use, antagonism), genotypic assays (16S rRNA sequencing) and plant growth promotion. Results showed a great morphological, metabolic and genetic variability among bacterial isolates. All isolates showed positive activity for catalase and protease enzymes and, 90% of the isolates showed positive activity for amylase, catalase and, nitrogenase. All isolates were able to metabolize sucrose and malic acid in contrast with mannitol, which was metabolized only by one isolate. For the other carbon sources, we observed a great variability in its use by the isolates. Most isolates showed antibiosis against Rhizoctonia solani (75%) and Sclerotinia sclerotiorum (55%) and, 50% of them showed antibiosis against both pathogens. Six isolates showed simultaneous ability of antibiosis, inorganic phosphate solubilization and protease activity. Based on phylogenetic analysis of the 16S rRNA gene all the isolates belong to Bacillus genus. Under greenhouse conditions, two isolates (S4 and S22) improved to about 24%, 25%, 30% and 31% the Total N, leaf area, shoot dry weight and root dry weight, respectively, of rice plants, indicating that they should be tested for this ability under field conditions.
format Online
Article
Text
id pubmed-5790645
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-57906452018-01-31 Polyphasic characterization of bacteria obtained from upland rice cultivated in Cerrado soil() Braga, Lívia Fabiana Oliveira, Fênix Araújo de Couto, Eva Aparecida Prado do Santos, Karina Freire d’Eça Nogueira Ferreira, Enderson Petrônio de Brito Martin-Didonet, Claudia Cristina Garcia Braz J Microbiol Research Paper This work aimed to characterize 20 isolates obtained from upland rice plants, based on phenotypic (morphology, enzymatic activity, inorganic phosphate solubilization, carbon source use, antagonism), genotypic assays (16S rRNA sequencing) and plant growth promotion. Results showed a great morphological, metabolic and genetic variability among bacterial isolates. All isolates showed positive activity for catalase and protease enzymes and, 90% of the isolates showed positive activity for amylase, catalase and, nitrogenase. All isolates were able to metabolize sucrose and malic acid in contrast with mannitol, which was metabolized only by one isolate. For the other carbon sources, we observed a great variability in its use by the isolates. Most isolates showed antibiosis against Rhizoctonia solani (75%) and Sclerotinia sclerotiorum (55%) and, 50% of them showed antibiosis against both pathogens. Six isolates showed simultaneous ability of antibiosis, inorganic phosphate solubilization and protease activity. Based on phylogenetic analysis of the 16S rRNA gene all the isolates belong to Bacillus genus. Under greenhouse conditions, two isolates (S4 and S22) improved to about 24%, 25%, 30% and 31% the Total N, leaf area, shoot dry weight and root dry weight, respectively, of rice plants, indicating that they should be tested for this ability under field conditions. Elsevier 2017-08-05 /pmc/articles/PMC5790645/ /pubmed/28838812 http://dx.doi.org/10.1016/j.bjm.2017.04.004 Text en © 2017 Sociedade Brasileira de Microbiologia. Published by Elsevier Editora Ltda. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Paper
Braga, Lívia Fabiana
Oliveira, Fênix Araújo de
Couto, Eva Aparecida Prado do
Santos, Karina Freire d’Eça Nogueira
Ferreira, Enderson Petrônio de Brito
Martin-Didonet, Claudia Cristina Garcia
Polyphasic characterization of bacteria obtained from upland rice cultivated in Cerrado soil()
title Polyphasic characterization of bacteria obtained from upland rice cultivated in Cerrado soil()
title_full Polyphasic characterization of bacteria obtained from upland rice cultivated in Cerrado soil()
title_fullStr Polyphasic characterization of bacteria obtained from upland rice cultivated in Cerrado soil()
title_full_unstemmed Polyphasic characterization of bacteria obtained from upland rice cultivated in Cerrado soil()
title_short Polyphasic characterization of bacteria obtained from upland rice cultivated in Cerrado soil()
title_sort polyphasic characterization of bacteria obtained from upland rice cultivated in cerrado soil()
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5790645/
https://www.ncbi.nlm.nih.gov/pubmed/28838812
http://dx.doi.org/10.1016/j.bjm.2017.04.004
work_keys_str_mv AT bragaliviafabiana polyphasiccharacterizationofbacteriaobtainedfromuplandricecultivatedincerradosoil
AT oliveirafenixaraujode polyphasiccharacterizationofbacteriaobtainedfromuplandricecultivatedincerradosoil
AT coutoevaaparecidapradodo polyphasiccharacterizationofbacteriaobtainedfromuplandricecultivatedincerradosoil
AT santoskarinafreiredecanogueira polyphasiccharacterizationofbacteriaobtainedfromuplandricecultivatedincerradosoil
AT ferreiraendersonpetroniodebrito polyphasiccharacterizationofbacteriaobtainedfromuplandricecultivatedincerradosoil
AT martindidonetclaudiacristinagarcia polyphasiccharacterizationofbacteriaobtainedfromuplandricecultivatedincerradosoil