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Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit

Colletotrichum musae is an important cosmopolitan pathogenic fungus that causes anthracnose in banana fruit. The entire genome of C. musae isolate GM20 (CMM 4420), originally isolated from infected banana fruit from Alagoas State, Brazil, was sequenced and annotated. The pathogen genomic DNA was seq...

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Autores principales: Silva Junior, Wilson José da, Falcão, Raul Maia, Sousa-Paula, Lucas Christian de, Sbaraini, Nicolau, Vieira, Willie Anderson dos Santos, Lima, Waléria Guerreiro, Paiva Junior, Sérgio de Sá Leitão, Staats, Charley Christian, Schrank, Augusto, Benko-Iseppon, Ana Maria, Balbino, Valdir de Queiroz, Câmara, Marcos Paz Saraiva
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5790810/
https://www.ncbi.nlm.nih.gov/pubmed/29387740
http://dx.doi.org/10.1016/j.dib.2018.01.002
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author Silva Junior, Wilson José da
Falcão, Raul Maia
Sousa-Paula, Lucas Christian de
Sbaraini, Nicolau
Vieira, Willie Anderson dos Santos
Lima, Waléria Guerreiro
Paiva Junior, Sérgio de Sá Leitão
Staats, Charley Christian
Schrank, Augusto
Benko-Iseppon, Ana Maria
Balbino, Valdir de Queiroz
Câmara, Marcos Paz Saraiva
author_facet Silva Junior, Wilson José da
Falcão, Raul Maia
Sousa-Paula, Lucas Christian de
Sbaraini, Nicolau
Vieira, Willie Anderson dos Santos
Lima, Waléria Guerreiro
Paiva Junior, Sérgio de Sá Leitão
Staats, Charley Christian
Schrank, Augusto
Benko-Iseppon, Ana Maria
Balbino, Valdir de Queiroz
Câmara, Marcos Paz Saraiva
author_sort Silva Junior, Wilson José da
collection PubMed
description Colletotrichum musae is an important cosmopolitan pathogenic fungus that causes anthracnose in banana fruit. The entire genome of C. musae isolate GM20 (CMM 4420), originally isolated from infected banana fruit from Alagoas State, Brazil, was sequenced and annotated. The pathogen genomic DNA was sequenced on HiSeq Illumina platform. The C. musae GM20 genome has 50,635,197 bp with G + C content of 53.74% and in its present assembly has 2763 scaffolds, harboring 13,451 putative genes with an average length of 1626 bp. Gene prediction and annotation was performed by Funannotate pipeline, using a pattern for gene identification based on BUSCO.
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spelling pubmed-57908102018-01-31 Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit Silva Junior, Wilson José da Falcão, Raul Maia Sousa-Paula, Lucas Christian de Sbaraini, Nicolau Vieira, Willie Anderson dos Santos Lima, Waléria Guerreiro Paiva Junior, Sérgio de Sá Leitão Staats, Charley Christian Schrank, Augusto Benko-Iseppon, Ana Maria Balbino, Valdir de Queiroz Câmara, Marcos Paz Saraiva Data Brief Genetics, Genomics and Molecular Biology Colletotrichum musae is an important cosmopolitan pathogenic fungus that causes anthracnose in banana fruit. The entire genome of C. musae isolate GM20 (CMM 4420), originally isolated from infected banana fruit from Alagoas State, Brazil, was sequenced and annotated. The pathogen genomic DNA was sequenced on HiSeq Illumina platform. The C. musae GM20 genome has 50,635,197 bp with G + C content of 53.74% and in its present assembly has 2763 scaffolds, harboring 13,451 putative genes with an average length of 1626 bp. Gene prediction and annotation was performed by Funannotate pipeline, using a pattern for gene identification based on BUSCO. Elsevier 2018-01-08 /pmc/articles/PMC5790810/ /pubmed/29387740 http://dx.doi.org/10.1016/j.dib.2018.01.002 Text en © 2018 Published by Elsevier Inc. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Silva Junior, Wilson José da
Falcão, Raul Maia
Sousa-Paula, Lucas Christian de
Sbaraini, Nicolau
Vieira, Willie Anderson dos Santos
Lima, Waléria Guerreiro
Paiva Junior, Sérgio de Sá Leitão
Staats, Charley Christian
Schrank, Augusto
Benko-Iseppon, Ana Maria
Balbino, Valdir de Queiroz
Câmara, Marcos Paz Saraiva
Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit
title Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit
title_full Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit
title_fullStr Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit
title_full_unstemmed Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit
title_short Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit
title_sort draft genome assembly of colletotrichum musae, the pathogen of banana fruit
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5790810/
https://www.ncbi.nlm.nih.gov/pubmed/29387740
http://dx.doi.org/10.1016/j.dib.2018.01.002
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