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Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit
Colletotrichum musae is an important cosmopolitan pathogenic fungus that causes anthracnose in banana fruit. The entire genome of C. musae isolate GM20 (CMM 4420), originally isolated from infected banana fruit from Alagoas State, Brazil, was sequenced and annotated. The pathogen genomic DNA was seq...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5790810/ https://www.ncbi.nlm.nih.gov/pubmed/29387740 http://dx.doi.org/10.1016/j.dib.2018.01.002 |
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author | Silva Junior, Wilson José da Falcão, Raul Maia Sousa-Paula, Lucas Christian de Sbaraini, Nicolau Vieira, Willie Anderson dos Santos Lima, Waléria Guerreiro Paiva Junior, Sérgio de Sá Leitão Staats, Charley Christian Schrank, Augusto Benko-Iseppon, Ana Maria Balbino, Valdir de Queiroz Câmara, Marcos Paz Saraiva |
author_facet | Silva Junior, Wilson José da Falcão, Raul Maia Sousa-Paula, Lucas Christian de Sbaraini, Nicolau Vieira, Willie Anderson dos Santos Lima, Waléria Guerreiro Paiva Junior, Sérgio de Sá Leitão Staats, Charley Christian Schrank, Augusto Benko-Iseppon, Ana Maria Balbino, Valdir de Queiroz Câmara, Marcos Paz Saraiva |
author_sort | Silva Junior, Wilson José da |
collection | PubMed |
description | Colletotrichum musae is an important cosmopolitan pathogenic fungus that causes anthracnose in banana fruit. The entire genome of C. musae isolate GM20 (CMM 4420), originally isolated from infected banana fruit from Alagoas State, Brazil, was sequenced and annotated. The pathogen genomic DNA was sequenced on HiSeq Illumina platform. The C. musae GM20 genome has 50,635,197 bp with G + C content of 53.74% and in its present assembly has 2763 scaffolds, harboring 13,451 putative genes with an average length of 1626 bp. Gene prediction and annotation was performed by Funannotate pipeline, using a pattern for gene identification based on BUSCO. |
format | Online Article Text |
id | pubmed-5790810 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-57908102018-01-31 Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit Silva Junior, Wilson José da Falcão, Raul Maia Sousa-Paula, Lucas Christian de Sbaraini, Nicolau Vieira, Willie Anderson dos Santos Lima, Waléria Guerreiro Paiva Junior, Sérgio de Sá Leitão Staats, Charley Christian Schrank, Augusto Benko-Iseppon, Ana Maria Balbino, Valdir de Queiroz Câmara, Marcos Paz Saraiva Data Brief Genetics, Genomics and Molecular Biology Colletotrichum musae is an important cosmopolitan pathogenic fungus that causes anthracnose in banana fruit. The entire genome of C. musae isolate GM20 (CMM 4420), originally isolated from infected banana fruit from Alagoas State, Brazil, was sequenced and annotated. The pathogen genomic DNA was sequenced on HiSeq Illumina platform. The C. musae GM20 genome has 50,635,197 bp with G + C content of 53.74% and in its present assembly has 2763 scaffolds, harboring 13,451 putative genes with an average length of 1626 bp. Gene prediction and annotation was performed by Funannotate pipeline, using a pattern for gene identification based on BUSCO. Elsevier 2018-01-08 /pmc/articles/PMC5790810/ /pubmed/29387740 http://dx.doi.org/10.1016/j.dib.2018.01.002 Text en © 2018 Published by Elsevier Inc. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Genetics, Genomics and Molecular Biology Silva Junior, Wilson José da Falcão, Raul Maia Sousa-Paula, Lucas Christian de Sbaraini, Nicolau Vieira, Willie Anderson dos Santos Lima, Waléria Guerreiro Paiva Junior, Sérgio de Sá Leitão Staats, Charley Christian Schrank, Augusto Benko-Iseppon, Ana Maria Balbino, Valdir de Queiroz Câmara, Marcos Paz Saraiva Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit |
title | Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit |
title_full | Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit |
title_fullStr | Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit |
title_full_unstemmed | Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit |
title_short | Draft genome assembly of Colletotrichum musae, the pathogen of banana fruit |
title_sort | draft genome assembly of colletotrichum musae, the pathogen of banana fruit |
topic | Genetics, Genomics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5790810/ https://www.ncbi.nlm.nih.gov/pubmed/29387740 http://dx.doi.org/10.1016/j.dib.2018.01.002 |
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