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Deep learning analyzes Helicobacter pylori infection by upper gastrointestinal endoscopy images

BACKGROUND AND STUDY AIMS : Helicobacter pylori (HP)-associated chronic gastritis can cause mucosal atrophy and intestinal metaplasia, both of which increase the risk of gastric cancer. The accurate diagnosis of HP infection during routine medical checks is important. We aimed to develop a convoluti...

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Autores principales: Itoh, Takumi, Kawahira, Hiroshi, Nakashima, Hirotaka, Yata, Noriko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: © Georg Thieme Verlag KG 2018
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5794437/
https://www.ncbi.nlm.nih.gov/pubmed/29399610
http://dx.doi.org/10.1055/s-0043-120830
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author Itoh, Takumi
Kawahira, Hiroshi
Nakashima, Hirotaka
Yata, Noriko
author_facet Itoh, Takumi
Kawahira, Hiroshi
Nakashima, Hirotaka
Yata, Noriko
author_sort Itoh, Takumi
collection PubMed
description BACKGROUND AND STUDY AIMS : Helicobacter pylori (HP)-associated chronic gastritis can cause mucosal atrophy and intestinal metaplasia, both of which increase the risk of gastric cancer. The accurate diagnosis of HP infection during routine medical checks is important. We aimed to develop a convolutional neural network (CNN), which is a machine-learning algorithm similar to deep learning, capable of recognizing specific features of gastric endoscopy images. The goal behind developing such a system was to detect HP infection early, thus preventing gastric cancer. PATIENTS AND METHODS:  For the development of the CNN, we used 179 upper gastrointestinal endoscopy images obtained from 139 patients (65 were HP-positive: ≥ 10 U/mL and 74 were HP-negative: < 3 U/mL on HP IgG antibody assessment). Of the 179 images, 149 were used as training images, and the remaining 30 (15 from HP-negative patients and 15 from HP-positive patients) were set aside to be used as test images. The 149 training images were subjected to data augmentation, which yielded 596 images. We used the CNN to create a learning tool that would recognize HP infection and assessed the decision accuracy of the CNN with the 30 test images by calculating the sensitivity, specificity, and area under the receiver operating characteristic (ROC) curve (AUC). RESULTS:  The sensitivity and specificity of the CNN for the detection of HP infection were 86.7 % and 86.7 %, respectively, and the AUC was 0.956. CONCLUSIONS:  CNN-aided diagnosis of HP infection seems feasible and is expected to facilitate and improve diagnosis during health check-ups.
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spelling pubmed-57944372018-02-02 Deep learning analyzes Helicobacter pylori infection by upper gastrointestinal endoscopy images Itoh, Takumi Kawahira, Hiroshi Nakashima, Hirotaka Yata, Noriko Endosc Int Open BACKGROUND AND STUDY AIMS : Helicobacter pylori (HP)-associated chronic gastritis can cause mucosal atrophy and intestinal metaplasia, both of which increase the risk of gastric cancer. The accurate diagnosis of HP infection during routine medical checks is important. We aimed to develop a convolutional neural network (CNN), which is a machine-learning algorithm similar to deep learning, capable of recognizing specific features of gastric endoscopy images. The goal behind developing such a system was to detect HP infection early, thus preventing gastric cancer. PATIENTS AND METHODS:  For the development of the CNN, we used 179 upper gastrointestinal endoscopy images obtained from 139 patients (65 were HP-positive: ≥ 10 U/mL and 74 were HP-negative: < 3 U/mL on HP IgG antibody assessment). Of the 179 images, 149 were used as training images, and the remaining 30 (15 from HP-negative patients and 15 from HP-positive patients) were set aside to be used as test images. The 149 training images were subjected to data augmentation, which yielded 596 images. We used the CNN to create a learning tool that would recognize HP infection and assessed the decision accuracy of the CNN with the 30 test images by calculating the sensitivity, specificity, and area under the receiver operating characteristic (ROC) curve (AUC). RESULTS:  The sensitivity and specificity of the CNN for the detection of HP infection were 86.7 % and 86.7 %, respectively, and the AUC was 0.956. CONCLUSIONS:  CNN-aided diagnosis of HP infection seems feasible and is expected to facilitate and improve diagnosis during health check-ups. © Georg Thieme Verlag KG 2018-02 2018-02-01 /pmc/articles/PMC5794437/ /pubmed/29399610 http://dx.doi.org/10.1055/s-0043-120830 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License, which permits unrestricted reproduction and distribution, for non-commercial purposes only; and use and reproduction, but not distribution, of adapted material for non-commercial purposes only, provided the original work is properly cited.
spellingShingle Itoh, Takumi
Kawahira, Hiroshi
Nakashima, Hirotaka
Yata, Noriko
Deep learning analyzes Helicobacter pylori infection by upper gastrointestinal endoscopy images
title Deep learning analyzes Helicobacter pylori infection by upper gastrointestinal endoscopy images
title_full Deep learning analyzes Helicobacter pylori infection by upper gastrointestinal endoscopy images
title_fullStr Deep learning analyzes Helicobacter pylori infection by upper gastrointestinal endoscopy images
title_full_unstemmed Deep learning analyzes Helicobacter pylori infection by upper gastrointestinal endoscopy images
title_short Deep learning analyzes Helicobacter pylori infection by upper gastrointestinal endoscopy images
title_sort deep learning analyzes helicobacter pylori infection by upper gastrointestinal endoscopy images
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5794437/
https://www.ncbi.nlm.nih.gov/pubmed/29399610
http://dx.doi.org/10.1055/s-0043-120830
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