Cargando…

Novel experimental and software methods for image reconstruction and localization in capsule endoscopy

BACKGROUND AND STUDY AIMS : Capsule endoscopy (CE) is invaluable for minimally invasive endoscopy of the gastrointestinal tract; however, several technological limitations remain including lack of reliable lesion localization. We present an approach to 3D reconstruction and localization using visual...

Descripción completa

Detalles Bibliográficos
Autores principales: Koulaouzidis, Anastasios, Iakovidis, Dimitris K., Yung, Diana E., Mazomenos, Evangelos, Bianchi, Federico, Karagyris, Alexandros, Dimas, George, Stoyanov, Danail, Thorlacius, Henrik, Toth, Ervin, Ciuti, Gastone
Formato: Online Artículo Texto
Lenguaje:English
Publicado: © Georg Thieme Verlag KG 2018
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5794451/
https://www.ncbi.nlm.nih.gov/pubmed/29399619
http://dx.doi.org/10.1055/s-0043-121882
_version_ 1783297125606490112
author Koulaouzidis, Anastasios
Iakovidis, Dimitris K.
Yung, Diana E.
Mazomenos, Evangelos
Bianchi, Federico
Karagyris, Alexandros
Dimas, George
Stoyanov, Danail
Thorlacius, Henrik
Toth, Ervin
Ciuti, Gastone
author_facet Koulaouzidis, Anastasios
Iakovidis, Dimitris K.
Yung, Diana E.
Mazomenos, Evangelos
Bianchi, Federico
Karagyris, Alexandros
Dimas, George
Stoyanov, Danail
Thorlacius, Henrik
Toth, Ervin
Ciuti, Gastone
author_sort Koulaouzidis, Anastasios
collection PubMed
description BACKGROUND AND STUDY AIMS : Capsule endoscopy (CE) is invaluable for minimally invasive endoscopy of the gastrointestinal tract; however, several technological limitations remain including lack of reliable lesion localization. We present an approach to 3D reconstruction and localization using visual information from 2D CE images. PATIENTS AND METHODS : Colored thumbtacks were secured in rows to the internal wall of a LifeLike bowel model. A PillCam SB3 was calibrated and navigated linearly through the lumen by a high-precision robotic arm. The motion estimation algorithm used data (light falling on the object, fraction of reflected light and surface geometry) from 2D CE images in the video sequence to achieve 3D reconstruction of the bowel model at various frames. The ORB-SLAM technique was used for 3D reconstruction and CE localization within the reconstructed model. This algorithm compared pairs of points between images for reconstruction and localization. RESULTS:  As the capsule moved through the model bowel 42 to 66 video frames were obtained per pass. Mean absolute error in the estimated distance travelled by the CE was 4.1 ± 3.9 cm. Our algorithm was able to reconstruct the cylindrical shape of the model bowel with details of the attached thumbtacks. ORB-SLAM successfully reconstructed the bowel wall from simultaneous frames of the CE video. The “track” in the reconstruction corresponded well with the linear forwards-backwards movement of the capsule through the model lumen. CONCLUSION:  The reconstruction methods, detailed above, were able to achieve good quality reconstruction of the bowel model and localization of the capsule trajectory using information from the CE video and images alone.
format Online
Article
Text
id pubmed-5794451
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher © Georg Thieme Verlag KG
record_format MEDLINE/PubMed
spelling pubmed-57944512018-02-02 Novel experimental and software methods for image reconstruction and localization in capsule endoscopy Koulaouzidis, Anastasios Iakovidis, Dimitris K. Yung, Diana E. Mazomenos, Evangelos Bianchi, Federico Karagyris, Alexandros Dimas, George Stoyanov, Danail Thorlacius, Henrik Toth, Ervin Ciuti, Gastone Endosc Int Open BACKGROUND AND STUDY AIMS : Capsule endoscopy (CE) is invaluable for minimally invasive endoscopy of the gastrointestinal tract; however, several technological limitations remain including lack of reliable lesion localization. We present an approach to 3D reconstruction and localization using visual information from 2D CE images. PATIENTS AND METHODS : Colored thumbtacks were secured in rows to the internal wall of a LifeLike bowel model. A PillCam SB3 was calibrated and navigated linearly through the lumen by a high-precision robotic arm. The motion estimation algorithm used data (light falling on the object, fraction of reflected light and surface geometry) from 2D CE images in the video sequence to achieve 3D reconstruction of the bowel model at various frames. The ORB-SLAM technique was used for 3D reconstruction and CE localization within the reconstructed model. This algorithm compared pairs of points between images for reconstruction and localization. RESULTS:  As the capsule moved through the model bowel 42 to 66 video frames were obtained per pass. Mean absolute error in the estimated distance travelled by the CE was 4.1 ± 3.9 cm. Our algorithm was able to reconstruct the cylindrical shape of the model bowel with details of the attached thumbtacks. ORB-SLAM successfully reconstructed the bowel wall from simultaneous frames of the CE video. The “track” in the reconstruction corresponded well with the linear forwards-backwards movement of the capsule through the model lumen. CONCLUSION:  The reconstruction methods, detailed above, were able to achieve good quality reconstruction of the bowel model and localization of the capsule trajectory using information from the CE video and images alone. © Georg Thieme Verlag KG 2018-02 2018-02-01 /pmc/articles/PMC5794451/ /pubmed/29399619 http://dx.doi.org/10.1055/s-0043-121882 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License, which permits unrestricted reproduction and distribution, for non-commercial purposes only; and use and reproduction, but not distribution, of adapted material for non-commercial purposes only, provided the original work is properly cited.
spellingShingle Koulaouzidis, Anastasios
Iakovidis, Dimitris K.
Yung, Diana E.
Mazomenos, Evangelos
Bianchi, Federico
Karagyris, Alexandros
Dimas, George
Stoyanov, Danail
Thorlacius, Henrik
Toth, Ervin
Ciuti, Gastone
Novel experimental and software methods for image reconstruction and localization in capsule endoscopy
title Novel experimental and software methods for image reconstruction and localization in capsule endoscopy
title_full Novel experimental and software methods for image reconstruction and localization in capsule endoscopy
title_fullStr Novel experimental and software methods for image reconstruction and localization in capsule endoscopy
title_full_unstemmed Novel experimental and software methods for image reconstruction and localization in capsule endoscopy
title_short Novel experimental and software methods for image reconstruction and localization in capsule endoscopy
title_sort novel experimental and software methods for image reconstruction and localization in capsule endoscopy
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5794451/
https://www.ncbi.nlm.nih.gov/pubmed/29399619
http://dx.doi.org/10.1055/s-0043-121882
work_keys_str_mv AT koulaouzidisanastasios novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT iakovidisdimitrisk novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT yungdianae novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT mazomenosevangelos novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT bianchifederico novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT karagyrisalexandros novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT dimasgeorge novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT stoyanovdanail novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT thorlaciushenrik novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT tothervin novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy
AT ciutigastone novelexperimentalandsoftwaremethodsforimagereconstructionandlocalizationincapsuleendoscopy