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miRNAexpression profile of retinal pigment epithelial cells under oxidative stress conditions

Deep analysis of regulative mechanisms of transcription and translation in eukaryotes could improve knowledge of many genetic pathologies such as retinitis pigmentosa (RP). New layers of complexity have recently emerged with the discovery that ‘junk’ DNA is transcribed and, among these, miRNAs have...

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Autores principales: Donato, Luigi, Bramanti, Placido, Scimone, Concetta, Rinaldi, Carmela, D'Angelo, Rosalia, Sidoti, Antonina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5794457/
https://www.ncbi.nlm.nih.gov/pubmed/29435412
http://dx.doi.org/10.1002/2211-5463.12360
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author Donato, Luigi
Bramanti, Placido
Scimone, Concetta
Rinaldi, Carmela
D'Angelo, Rosalia
Sidoti, Antonina
author_facet Donato, Luigi
Bramanti, Placido
Scimone, Concetta
Rinaldi, Carmela
D'Angelo, Rosalia
Sidoti, Antonina
author_sort Donato, Luigi
collection PubMed
description Deep analysis of regulative mechanisms of transcription and translation in eukaryotes could improve knowledge of many genetic pathologies such as retinitis pigmentosa (RP). New layers of complexity have recently emerged with the discovery that ‘junk’ DNA is transcribed and, among these, miRNAs have assumed a preponderant role. We compared changes in the expression of miRNAs obtained from whole transcriptome analyses, between two groups of retinal pigment epithelium (RPE) cells, one untreated and the other exposed to the oxidant agent oxidized low‐density lipoprotein (oxLDL), examining four time points (1, 2, 4 and 6 h). We found that 23 miRNAs exhibited altered expression in the treated samples, targeting genes involved in several biochemical pathways, many of them associated to RP for the first time, such as those mediated by insulin receptor signaling and son of sevenless. Moreover, five RP causative genes (KLHL7, RDH11,CERKL, AIPL1 and USH1G) emerged as already validated targets of five altered miRNAs (hsa‐miR‐1307, hsa‐miR‐3064, hsa‐miR‐4709, hsa‐miR‐3615 and hsa‐miR‐637), suggesting a tight connection between induced oxidative stress and RP development and progression. This miRNA expression analysis of oxidative stress‐induced RPE cells has discovered new regulative functions of miRNAs in RP that should lead to the discovery of new ways to regulate the etiopathogenesis of RP.
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spelling pubmed-57944572018-02-12 miRNAexpression profile of retinal pigment epithelial cells under oxidative stress conditions Donato, Luigi Bramanti, Placido Scimone, Concetta Rinaldi, Carmela D'Angelo, Rosalia Sidoti, Antonina FEBS Open Bio Research Articles Deep analysis of regulative mechanisms of transcription and translation in eukaryotes could improve knowledge of many genetic pathologies such as retinitis pigmentosa (RP). New layers of complexity have recently emerged with the discovery that ‘junk’ DNA is transcribed and, among these, miRNAs have assumed a preponderant role. We compared changes in the expression of miRNAs obtained from whole transcriptome analyses, between two groups of retinal pigment epithelium (RPE) cells, one untreated and the other exposed to the oxidant agent oxidized low‐density lipoprotein (oxLDL), examining four time points (1, 2, 4 and 6 h). We found that 23 miRNAs exhibited altered expression in the treated samples, targeting genes involved in several biochemical pathways, many of them associated to RP for the first time, such as those mediated by insulin receptor signaling and son of sevenless. Moreover, five RP causative genes (KLHL7, RDH11,CERKL, AIPL1 and USH1G) emerged as already validated targets of five altered miRNAs (hsa‐miR‐1307, hsa‐miR‐3064, hsa‐miR‐4709, hsa‐miR‐3615 and hsa‐miR‐637), suggesting a tight connection between induced oxidative stress and RP development and progression. This miRNA expression analysis of oxidative stress‐induced RPE cells has discovered new regulative functions of miRNAs in RP that should lead to the discovery of new ways to regulate the etiopathogenesis of RP. John Wiley and Sons Inc. 2018-01-02 /pmc/articles/PMC5794457/ /pubmed/29435412 http://dx.doi.org/10.1002/2211-5463.12360 Text en © 2017 The Authors. Published by FEBS Press and John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Donato, Luigi
Bramanti, Placido
Scimone, Concetta
Rinaldi, Carmela
D'Angelo, Rosalia
Sidoti, Antonina
miRNAexpression profile of retinal pigment epithelial cells under oxidative stress conditions
title miRNAexpression profile of retinal pigment epithelial cells under oxidative stress conditions
title_full miRNAexpression profile of retinal pigment epithelial cells under oxidative stress conditions
title_fullStr miRNAexpression profile of retinal pigment epithelial cells under oxidative stress conditions
title_full_unstemmed miRNAexpression profile of retinal pigment epithelial cells under oxidative stress conditions
title_short miRNAexpression profile of retinal pigment epithelial cells under oxidative stress conditions
title_sort mirnaexpression profile of retinal pigment epithelial cells under oxidative stress conditions
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5794457/
https://www.ncbi.nlm.nih.gov/pubmed/29435412
http://dx.doi.org/10.1002/2211-5463.12360
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